RNA–Protein interactions for RNA: ENST00000379446.9

NEDD9-202, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NEDD9, Length 4,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-202ENST00000379446 CXXC5Q7LFL8 322 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 LSMEM1Q8N8F7 131 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 AQP11Q8NBQ7 271 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 CIDECQ96AQ7 238 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PDLIM5Q96HC4 596 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF582Q96NG8 517 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SNX18Q96RF0 628 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PIMREGQ9BSJ6 248 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TAS2R7Q9NYW3 318 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 THADAQ6YHU6 1953 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SLC5A10A0PJK1 596 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 J3KTA2 159 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 GABARAPO95166 117 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 HOXC4P09017 264 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SLC2A2P11168 524 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF250P15622 560 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PSMA1P25786 263 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 REEP5Q00765 189 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 GALEQ14376 348 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 GLB1L2Q8IW92 636 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TMEM41AQ96HV5 264 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 HRASLS5Q96KN8 279 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 OR2A14Q96R47 310 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 POLR2J2Q9GZM3 115 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SLA2Q9H6Q3 261 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 GLTPQ9NZD2 209 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 OR5V1Q9UGF6 321 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 STOML2Q9UJZ1 356 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SSR3Q9UNL2 185 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PLXNB2O15031 1838 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 MPDZO75970 2070 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PRAMEF27A3QJZ7 478 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ZNF670-ZNF695F2Z2N8 137 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PRAMEF4O60810 478 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 FZD7O75084 574 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 MTRF1O75570 445 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TPPPO94811 219 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 FUT1P19526 365 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 CHMP24386 653 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 POLR2HP52434 150 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ADAM8P78325 824 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 HNRNPA0Q13151 305 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 MAB21L1Q13394 359 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PROX2Q3B8N5 592 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 DEFB121Q5J5C9 76 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TOR2AQ5JU69 321 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PRAMEF9Q5VWM5 478 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TIGD3Q6B0B8 471 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 LAX1Q8IWV1 398 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ZFP41Q8N8Y5 198 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 OR2A1Q8NGT9 310 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 OR6F1Q8NGZ6 308 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 DYNC2LI1Q8TCX1 351 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ST8SIA4Q92187 359 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 NUDT9Q9BW91 350 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TMEFF2Q9UIK5 374 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 NDRG4Q9ULP0 352 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 C2CD3Q4AC94 2353 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 MIA3Q5JRA6 1907 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 NKX2-6A6NCS4 301 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SH2D7A6NKC9 451 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 KDM4EB2RXH2 506 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 H7C0S8 307 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 KHDRBS3O75525 346 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 HOXB6P17509 224 aaKnown RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 IKZF1Q13422 519 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TATDN3Q17R31 274 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 IGSF11Q5DX21 431 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 WBP2NLQ6ICG8 309 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TSPYL5Q86VY4 417 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 SULF2Q8IWU5 870 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 PDZD9Q8IXQ8 264 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 ADGRF3Q8IZF5 1079 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 BEST4Q8NFU0 473 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 COQ8AQ8NI60 647 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 CPNE4Q96A23 557 aaPredicted RBP5.95□□□□□ -1.46
NEDD9-202ENST00000379446 TCF7L1Q9HCS4 588 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 MGAT4AQ9UM21 535 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 LIPGQ9Y5X9 500 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 A3GALT2U3KPV4 340 aa5.95□□□□□ -1.46
NEDD9-202ENST00000379446 RALGAPA1Q6GYQ0 2036 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 CEP350Q5VT06 3117 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 SBF1O95248 1867 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 FAM230AA0A1W2PPH8 454 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 SLC22A23A1A5C7 686 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 SERINC4A6NH21 518 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 K7ENP7 123 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 ERP29P30040 261 aaKnown RBP5.94□□□□□ -1.46
NEDD9-202ENST00000379446 OR3A2P47893 321 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 NKX6-1P78426 367 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-202ENST00000379446 LIPKQ5VXJ0 399 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 INO80CQ6PI98 192 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-202ENST00000379446 PRSS48Q7RTY5 328 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 TRIM46Q7Z4K8 759 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 RFKQ969G6 155 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 ALKBH3Q96Q83 286 aaPredicted RBP5.94□□□□□ -1.46
NEDD9-202ENST00000379446 LYSMD1Q96S90 227 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 EMC6Q9BV81 110 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 RAB9BQ9NP90 201 aa5.94□□□□□ -1.46
NEDD9-202ENST00000379446 TESQ9UGI8 421 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms