RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MESTQ5EB52 335 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 THEM4Q5T1C6 240 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 C10orf128Q5T292 105 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 FAHD1Q6P587 224 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 KLHL17Q6TDP4 642 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 SEZ6L2Q6UXD5 910 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 FNDC8Q8TC99 324 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 ZC3HAV1LQ96H79 300 aaKnown RBP16.43■□□□□ 0.22
SSU72-203ENST00000378725 ZNF570Q96NI8 536 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 PLA2G12AQ9BZM1 189 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 NELFAQ9H3P2 528 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 SMURF2Q9HAU4 748 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 S100A14Q9HCY8 104 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 SLC25A15Q9Y619 301 aa16.43■□□□□ 0.22
SSU72-203ENST00000378725 TEX13CA0A0J9YWL9 993 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 A6NNC1 897 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 G3V2T6 193 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 BHLHE40O14503 412 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 ARHGEF9O43307 516 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 PPP1R3DO95685 299 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 NR2C1P13056 603 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 PPA1Q15181 289 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 TBRG1Q3YBR2 411 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 SLC25A47Q6Q0C1 308 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 ZDHHC13Q8IUH4 622 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 SVOPLQ8N434 492 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 OR8D4Q8NGM9 314 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 MUCL1Q96DR8 90 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 ERMAPQ96PL5 475 aaPredicted RBP16.42■□□□□ 0.22
SSU72-203ENST00000378725 RBP7Q96R05 134 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 PKP2Q99959 881 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 IFT27Q9BW83 186 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 ZNF556Q9HAH1 456 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 OBP2BQ9NPH6 170 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 POFUT2Q9Y2G5 429 aa16.42■□□□□ 0.22
SSU72-203ENST00000378725 ADGRG4Q8IZF6 3080 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 ARPC4-TTLL3A0A0A6YYG9 625 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 SLC22A23A1A5C7 686 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 PRSS37A4D1T9 235 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 DEFB108AA8MXU0 73 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 ANKRD65E5RJM6 399 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 XKRYO14609 159 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 IGFBP1P08833 259 aaPredicted RBP16.41■□□□□ 0.22
SSU72-203ENST00000378725 DAPP51397 102 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 MYBPC1Q00872 1141 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 KRR1Q13601 381 aaKnown RBP16.41■□□□□ 0.22
SSU72-203ENST00000378725 HIKESHIQ53FT3 197 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 ADCK1Q86TW2 530 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 ATG16L2Q8NAA4 619 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 OR52L1Q8NGH7 329 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 DNAJC9Q8WXX5 260 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 RASD2Q96D21 266 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 FOXB1Q99853 325 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 GABARAPL1Q9H0R8 117 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 SEMA6AQ9H2E6 1030 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 VSX1Q9NZR4 365 aaPredicted RBP16.41■□□□□ 0.22
SSU72-203ENST00000378725 AMDHD2Q9Y303 409 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 PTPN13Q12923 2485 aa16.41■□□□□ 0.22
SSU72-203ENST00000378725 A0A096LPE4 126 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 IGKV1D-43A0A0B4J1Z2 117 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 A0A1W2PPZ6 126 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 SOCS2O14508 198 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 SIAH2O43255 324 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 CTAG2O75638 210 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 OSMP13725 252 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 PRF1P14222 555 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 PAX7P23759 505 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 SSTR2P30874 369 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 CDKN2AP42771 156 aaKnown RBP16.4■□□□□ 0.22
SSU72-203ENST00000378725 CD47Q08722 323 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 NRN1LQ496H8 165 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 CLEC12AQ5QGZ9 265 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 WFDC8Q8IUA0 241 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 CCDC36Q8IYA8 594 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 LNX2Q8N448 690 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 OR52N5Q8NH56 324 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 SNX18Q96RF0 628 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 TSSK6Q9BXA6 273 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 BAIAP2Q9UQB8 552 aa16.4■□□□□ 0.22
SSU72-203ENST00000378725 SOX14O95416 240 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 SLC2A10O95528 541 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 HIST1H1CP16403 213 aaKnown RBP16.39■□□□□ 0.21
SSU72-203ENST00000378725 ZNF23P17027 643 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 LOXP28300 417 aaPredicted RBP16.39■□□□□ 0.21
SSU72-203ENST00000378725 ZNF84P51523 738 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 FMODQ06828 376 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 SLC36A3Q495N2 470 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 ZNF362Q5T0B9 420 aaPredicted RBP16.39■□□□□ 0.21
SSU72-203ENST00000378725 ZNF813Q6ZN06 617 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 PTCHD4Q6ZW05 846 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 NGBQ9NPG2 151 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 RASSF1Q9NS23 344 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 TBC1D23Q9NUY8 699 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 TMEM38BQ9NVV0 291 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 OAZ3Q9UMX2 235 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 UGT2A1Q9Y4X1 527 aa16.39■□□□□ 0.21
SSU72-203ENST00000378725 ALPK2Q86TB3 2170 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 A0A1W2PR80 420 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 ERICH4A6NGS2 130 aa16.38■□□□□ 0.21
SSU72-203ENST00000378725 H7C1C5 153 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms