RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 GAAP10253 952 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 PRDX3P30048 256 aaKnown RBP10.85□□□□□ -0.67
NPHP4-202ENST00000378161 RPS13P62277 151 aaKnown RBP10.85□□□□□ -0.67
NPHP4-202ENST00000378161 IL13RA1P78552 427 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 FRRS1Q6ZNA5 592 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 BCDIN3DQ7Z5W3 292 aaKnown RBP10.85□□□□□ -0.67
NPHP4-202ENST00000378161 LGALS14Q8TCE9 139 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 LCN9Q8WX39 176 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 FAM210BQ96KR6 192 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 TAF9BQ9HBM6 251 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 FKBP11Q9NYL4 201 aa10.85□□□□□ -0.67
NPHP4-202ENST00000378161 TNRC6CQ9HCJ0 1690 aaKnown RBP10.85□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM238C9JI98 176 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 LSSP48449 732 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 ERVFRD-1P60508 538 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 HIST1H3AP68431 136 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SEMG2Q02383 582 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 DCAF10Q5QP82 559 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 OR5W2Q8NH69 310 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SUSD6Q92537 303 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 VSTM5A8MXK1 200 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 MKRN2OSH3BPM6 223 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 RBMXL2O75526 392 aaKnown RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 KLF8O95600 359 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 RAB40ALP0C0E4 278 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SERPINA2P20848 420 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 BMP8BP34820 402 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 PRSS3P35030 304 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 CASRP41180 1078 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 BMP8AQ7Z5Y6 402 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SCD5Q86SK9 330 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 PPP1R1CQ8WVI7 109 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 RAB40AQ8WXH6 277 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 ZNF707Q96C28 371 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SLC6A7Q99884 636 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 WRAP53Q9BUR4 548 aaKnown RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 RNF122Q9H9V4 155 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 MYNNQ9NPC7 610 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 ZAR1LA6NP61 321 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 PYCARD-AS1I3L0S3 204 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SCDO00767 359 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 GAPDHSO14556 408 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SERPINA7P05543 415 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SFTPBP07988 381 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 ACKR3P25106 362 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 OR10J1P30954 320 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 CDKN1BP46527 198 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 PNLIPRP2P54317 469 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 CDK3Q00526 305 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 MTAPQ13126 283 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 TAF9Q16594 264 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 CST9LP1Q5W188 147 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 TNFAIP8L2Q6P589 184 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 TMEM220Q6QAJ8 160 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 LCTLQ6UWM7 567 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 LFNGQ8NES3 379 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 SYNPRQ8TBG9 265 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 FRZBQ92765 325 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 HAS2Q92819 552 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 LGR4Q9BXB1 951 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 GSX1Q9H4S2 264 aaPredicted RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 NPTNQ9Y639 398 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 NDUFB6O95139 128 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 GASTP01350 101 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 OR5AC1P0C628 307 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 MARS2Q96GW9 593 aaKnown RBP10.84□□□□□ -0.67
NPHP4-202ENST00000378161 RAB33BQ9H082 229 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 FBRSQ9HAH7 460 aa10.84□□□□□ -0.67
NPHP4-202ENST00000378161 TP53BP1Q12888 1972 aaPredicted RBP10.83□□□□□ -0.67
NPHP4-202ENST00000378161 PPP5D1E7EU14 171 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 EMC8O43402 210 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 GALR3O60755 368 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 TGFB1P01137 390 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 PRSS56P0CW18 603 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 CD37P11049 281 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 LIPCP11150 499 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ATP1B2P14415 290 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 PGAM2P15259 253 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 GABRA2P47869 451 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 TDGF1P3P51864 188 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 ZP1P60852 638 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 DHODHQ02127 395 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 PNLIPRP3Q17RR3 467 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 FAAP20Q6NZ36 180 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 LRRC56Q8IYG6 542 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 SDR9C7Q8NEX9 313 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 OR13C5Q8NGS8 318 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 CD200R1Q8TD46 325 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 THEM6Q8WUY1 208 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 REEP6Q96HR9 211 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 JSRP1Q96MG2 331 aaPredicted RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 IKZF5Q9H5V7 419 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 PATZ1Q9HBE1 687 aaKnown RBP10.83□□□□□ -0.68
NPHP4-202ENST00000378161 XKRY2A2RUG3 117 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 A8MWP6 167 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 XKRYO14609 159 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 SOCS5O75159 536 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 PDYNP01213 254 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 AKR1C4P17516 323 aa10.83□□□□□ -0.68
NPHP4-202ENST00000378161 MMP11P24347 488 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms