RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 ENTPD5O75356 428 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 IGF2P01344 180 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 HEXAP06865 529 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 OR8G3PP0DMU2 310 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 ACADSP16219 412 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 MAKP20794 623 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 RPL4P36578 427 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 CTXN1P60606 82 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 RAB1AP62820 205 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 GALK2Q01415 458 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 SNTB2Q13425 540 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 DAG1Q14118 895 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 RAB39AQ14964 217 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 KRT72Q14CN4 511 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 ADIPOQQ15848 244 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 CARTPTQ16568 116 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 TBPL2Q6SJ96 375 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 C16orf89Q6UX73 402 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 SLC16A14Q7RTX9 510 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 PIWIL3Q7Z3Z3 882 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 OAFQ86UD1 273 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 PGAM4Q8N0Y7 254 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 LRRC18Q8N456 261 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 SLC22A24Q8N4F4 322 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 FAM169BQ8N8A8 192 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 OR4K5Q8NGD3 323 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 OR13C2Q8NGS9 318 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 ACOT11Q8WXI4 607 aaPredicted RBP10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 NSMAFQ92636 917 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 RHNO1Q9BSD3 238 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 MAN2C1Q9NTJ4 1040 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 TMEM38BQ9NVV0 291 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 STX18Q9P2W9 335 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 SPEF1Q9Y4P9 236 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 FKBP7Q9Y680 259 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 ENPP4Q9Y6X5 453 aa10.04□□□□□ -0.8
SMARCE1-203ENST00000377808 A0A087WUU8 490 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 DYNC1I1O14576 645 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 LY6HO94772 140 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 DIRAS1O95057 198 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 SLC2A10O95528 541 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 H1F0P07305 194 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 THBS4P35443 961 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 MSX2P35548 267 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 HGFACQ04756 655 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 PRKCDQ05655 676 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 SAMD4BQ5PRF9 694 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 TMEM53Q6P2H8 277 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 LRFN4Q6PJG9 635 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 MBOAT2Q6ZWT7 520 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF627Q7L945 461 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 PIGWQ7Z7B1 504 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 SKA3Q8IX90 412 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 DEFB107AQ8IZN7 70 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 SVOPLQ8N434 492 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 ZNF525Q8N782 197 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 NUP37Q8NFH4 326 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 IL17RDQ8NFM7 739 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 OR52J3Q8NH60 311 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 LIPHQ8WWY8 451 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 HDAC2Q92769 488 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 CDRT15Q96T59 188 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 REG4Q9BYZ8 158 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 NDEL1Q9GZM8 345 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 KCNN2Q9H2S1 579 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 TXNIPQ9H3M7 391 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 PLK3Q9H4B4 646 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 NMNAT1Q9HAN9 279 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 DYNLRB1Q9NP97 96 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 DCAF13Q9NV06 445 aaKnown RBP10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 NDE1Q9NXR1 346 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 B3GNT2Q9NY97 397 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 MAGEL2Q9UJ55 1249 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 HIF3AQ9Y2N7 669 aa10.03□□□□□ -0.8
SMARCE1-203ENST00000377808 ALPK2Q86TB3 2170 aa10.02□□□□□ -0.8
SMARCE1-203ENST00000377808 IGHV4-30-2A0A087WSY4 118 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 SH3PXD2BA1X283 911 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 B9A039 149 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 H7C417 338 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 TP53P04637 393 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 NR2C1P13056 603 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 ZNF14P17017 642 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 NPR2P20594 1047 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 PCSK6P29122 969 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 CDAP32320 146 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 EFNA4P52798 201 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 RPL27P61353 136 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 PPP2R2BQ00005 443 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 SPIBQ01892 262 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 HSF2Q03933 536 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 FMODQ06828 376 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 SGCAQ16586 387 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 SLC36A2Q495M3 483 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 ARMC4Q5T2S8 1044 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 PODNL1Q6PEZ8 512 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 RNF113BQ8IZP6 322 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 FAM86B1Q8N7N1 296 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 ANKS4BQ8N8V4 417 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 FGFBP3Q8TAT2 258 aa10.02□□□□□ -0.81
SMARCE1-203ENST00000377808 MCUR1Q96AQ8 359 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms