RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 CHST8Q9H2A9 424 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 FBXO7Q9Y3I1 522 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 OR6C6A6NF89 314 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 ZNF732B4DXR9 585 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 PRICKLE3O43900 615 aaPredicted RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 PAN3Q58A45 887 aaKnown RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 DESI1Q6ICB0 168 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 RBM45Q8IUH3 476 aaKnown RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 CPEB3Q8NE35 698 aaKnown RBP12.5□□□□□ -0.41
GPC6-201ENST00000377047 BBS1Q8NFJ9 593 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 LGALS14Q8TCE9 139 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 STK35Q8TDR2 534 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 DEDD2Q8WXF8 326 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 MED18Q9BUE0 208 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 TUBB1Q9H4B7 451 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 EMC7Q9NPA0 242 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 EVPLQ92817 2033 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 PMS2P1A4D2B8 440 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 CAMK2BQ13554 666 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 KHDC1LQ5JSQ8 128 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 TAAR9Q96RI9 348 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 GALNT9Q9HCQ5 603 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 TSPAN11A1L157 253 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 EFSO43281 561 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 SPINT2O43291 252 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 TMPRSS11DO60235 418 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 HTR2BP41595 481 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 FAM71CQ8NEG0 241 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 MALSU1Q96EH3 234 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 OR14A2Q96R54 314 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 MFFQ9GZY8 342 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 CRLF2Q9HC73 371 aa12.5□□□□□ -0.41
GPC6-201ENST00000377047 CCDC187A0A096LP49 1063 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 TNFSF11O14788 317 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 QDPRP09417 244 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 APEHP13798 732 aaKnown RBP12.49□□□□□ -0.41
GPC6-201ENST00000377047 SELEP16581 610 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 SHC1P29353 583 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 POLR2IP36954 125 aaKnown RBP12.49□□□□□ -0.41
GPC6-201ENST00000377047 RNLSQ5VYX0 342 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 OR52I1Q8NGK6 324 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 NUDT8Q8WV74 236 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 IGHV3-15A0A0B4J1V0 119 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 RAB27BO00194 218 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 ARHGAP33O14559 1287 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 DEGS1O15121 323 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 TEAD1P28347 426 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 NKAIN4Q8IVV8 208 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 TEX101Q9BY14 249 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 FIGNL2A6NMB9 653 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 CTGFP29279 349 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 RPL34P49207 117 aaKnown RBP12.49□□□□□ -0.41
GPC6-201ENST00000377047 LSAMPQ13449 338 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 ZNF674Q2M3X9 581 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 SLC35D3Q5M8T2 416 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 KMT5CQ86Y97 462 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 SEMA6DQ8NFY4 1073 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 ANKRD9Q96BM1 317 aaPredicted RBP12.49□□□□□ -0.41
GPC6-201ENST00000377047 RTL8AQ9BWD3 113 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 NTNG1Q9Y2I2 539 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 R4GN57 208 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 C4orf47A7E2U8 309 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 HMGN4O00479 90 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 HS3ST1O14792 307 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 MAP2K6P52564 334 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 FGFBP1Q14512 234 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 COMMD7Q86VX2 200 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 RNF170Q96K19 258 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 CNTNAP3BQ96NU0 1288 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 NDRG3Q9UGV2 375 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 TNFSF8P32971 234 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 TMEM185AQ8NFB2 350 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 KCNE4Q8WWG9 221 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 UFSP2Q9NUQ7 469 aa12.49□□□□□ -0.41
GPC6-201ENST00000377047 A0A096LPE4 126 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 A0A1W2PPZ6 126 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 BOLA2-SMG1P6H3BVE0 249 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 OLFM2O95897 454 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ALDH3B1P43353 468 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ASTLQ6HA08 431 aaPredicted RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 RDH10Q8IZV5 341 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 RBMXL3Q8N7X1 1067 aaKnown RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 BEST4Q8NFU0 473 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 BARHL1Q9BZE3 327 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 UBQLN3Q9H347 655 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ASIC5Q9NY37 505 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 NDRG4Q9ULP0 352 aaKnown RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 ECM29Q5VYK3 1845 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 SPTY2D1-AS1A0A0U1RR47 76 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ZNF891A8MT65 544 aaPredicted RBP12.48□□□□□ -0.41
GPC6-201ENST00000377047 HSD17B6O14756 317 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 NID1P14543 1247 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 PPICP45877 212 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 GPR3P46089 330 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 PLK5Q496M5 336 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 ENTHD1Q8IYW4 607 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 DEFB124Q8NES8 71 aa12.48□□□□□ -0.41
GPC6-201ENST00000377047 BTBD17A6NE02 478 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms