RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 CYSLTR2Q9NS75 346 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 MRPL39Q9NYK5 338 aaKnown RBP11.15□□□□□ -0.62
VRK3-202ENST00000377011 TINAGQ9UJW2 476 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 PCNX3Q9H6A9 2034 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 DCHS2Q6V1P9 2916 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 UNC79Q9P2D8 2635 aa11.15□□□□□ -0.62
VRK3-202ENST00000377011 A0A0B4J293 547 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 A1L4Q6 167 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 C2orf72A6NCS6 295 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 LRRC3CA6NJW4 275 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 PLPP2O43688 288 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 AGFG2O95081 481 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 TBXA2RP21731 343 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 ABCD3P28288 659 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 TALDO1P37837 337 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 MAP3K8P41279 467 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 RBM34P42696 430 aaKnown RBP11.15□□□□□ -0.63
VRK3-202ENST00000377011 RFX3P48380 749 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 INPP1P49441 399 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 GZMKP49863 264 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 FAPQ12884 760 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 OR1Q1Q15612 314 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 C3AR1Q16581 482 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 PLBD1Q6P4A8 553 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 PAMR1Q6UXH9 720 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 C3P1Q6ZMU1 363 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 RTL4Q6ZR62 310 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 VASH1Q7L8A9 365 aaPredicted RBP11.15□□□□□ -0.63
VRK3-202ENST00000377011 FJX1Q86VR8 437 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 BBS1Q8NFJ9 593 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 OR7G1Q8NGA0 311 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 ART5Q96L15 291 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 PSMG3-AS1Q96PY0 264 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 TTTY12Q9BZ98 90 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 SLC35A3Q9Y2D2 325 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 KLF13Q9Y2Y9 288 aaPredicted RBP11.15□□□□□ -0.63
VRK3-202ENST00000377011 MED31Q9Y3C7 131 aa11.15□□□□□ -0.63
VRK3-202ENST00000377011 LINC00854A0A1B0GVQ3 168 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 FAM240BA0A1B0GVZ2 78 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 DAPL1A0PJW8 107 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 SYNDIG1LA6NDD5 238 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 OR6C76A6NM76 312 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 PRR23D1E9PI22 279 aaPredicted RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 GLSO94925 669 aaPredicted RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 CRYABP02511 175 aaKnown RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 PRR23D2P0DMB1 279 aaPredicted RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 CT45A8P0DMV1 189 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 CT45A9P0DMV2 189 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 IFI30P13284 250 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 HTR2AP28223 471 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 ATP12AP54707 1039 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 FXYD6P3P58550 94 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 HOXC5Q00444 222 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 CDSNQ15517 529 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 NTRK2Q16620 822 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 TATDN3Q17R31 274 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 CT45A2Q5DJT8 189 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 MRPL2Q5T653 305 aaKnown RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 FNDC7Q5VTL7 733 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 OPN5Q6U736 354 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 ZNF767PQ75MW2 155 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 GRAMD2AQ8IUY3 354 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 COX18Q8N8Q8 333 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 OR51G2Q8NGK0 314 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 PAQR8Q8TEZ7 354 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 UBASH3BQ8TF42 649 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 KISS1RQ969F8 398 aaPredicted RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 VSTM2LQ96N03 204 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 DCLRE1CQ96SD1 692 aaKnown RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 B3GAT2Q9NPZ5 323 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 FLRT3Q9NZU0 649 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 RABL2AQ9UBK7 228 aaPredicted RBP11.14□□□□□ -0.63
VRK3-202ENST00000377011 RABL2BQ9UNT1 228 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 NPFFR2Q9Y5X5 522 aa11.14□□□□□ -0.63
VRK3-202ENST00000377011 CSMD1Q96PZ7 3565 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 ITPR2Q14571 2701 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 A0A1B0GTH9 108 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 SHISA3A0PJX4 238 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 WIPF3A6NGB9 483 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CD8B2A6NJW9 211 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 RIIAD1A6NNX1 92 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CHP2O43745 196 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 SLC2A10O95528 541 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CLDN1O95832 211 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CD1AP06126 327 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CD8BP10966 210 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CNR1P21554 472 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 COL8A1P27658 744 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 PTGDSP41222 190 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 MAGEA5P43359 124 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 CAV3P56539 151 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 GPR68Q15743 365 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 ARHGAP11AQ6P4F7 1023 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 RPRMLQ8N4K4 120 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 MS4A15Q8N5U1 240 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 TMEM251Q8N6I4 163 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 OR5W2Q8NH69 310 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 SLC22A8Q8TCC7 542 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 HGDQ93099 445 aa11.13□□□□□ -0.63
VRK3-202ENST00000377011 TIMP4Q99727 224 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms