RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 SH3GL3Q99963 347 aa12.37□□□□□ -0.43
CLCN6-203ENST00000376490 NMNAT1Q9HAN9 279 aaPredicted RBP12.37□□□□□ -0.43
CLCN6-203ENST00000376490 CA10Q9NS85 328 aa12.37□□□□□ -0.43
CLCN6-203ENST00000376490 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
CLCN6-203ENST00000376490 HIF3AQ9Y2N7 669 aa12.37□□□□□ -0.43
CLCN6-203ENST00000376490 TRAV27A0A087WT01 109 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 IGHV2OR16-5A0A0B4J2B6 119 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 EFCAB9A8MZ26 197 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 DIRAS1O95057 198 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 SAGP10523 405 aaPredicted RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 HSD17B1P14061 328 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 ZNF14P17017 642 aaPredicted RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 SERPINF1P36955 418 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 GIPRP48546 466 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 PTDSS1P48651 473 aaKnown RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 DAP3P51398 398 aaKnown RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 CHRNB3Q05901 458 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 FHL1Q13642 323 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 ADIPOQQ15848 244 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 ETFDHQ16134 617 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 ALG10Q5BKT4 473 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 MBOAT2Q6ZWT7 520 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 IGFN1Q86VF2 1251 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 CYP4Z1Q86W10 505 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 CDK20Q8IZL9 346 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 RNF113BQ8IZP6 322 aaKnown RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 FITM2Q8N6M3 262 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 LRRC75AQ8NAA5 344 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 OR4F15Q8NGB8 312 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 C7orf34Q96L11 122 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 SEPHS2Q99611 448 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 TXNIPQ9H3M7 391 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 GORASP2Q9H8Y8 452 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 TMEM38BQ9NVV0 291 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 NDUFAF4Q9P032 175 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 ZNF346Q9UL40 294 aaKnown RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 FAM32AQ9Y421 112 aaKnown RBP12.36□□□□□ -0.43
CLCN6-203ENST00000376490 V9GYQ6 96 aa12.36□□□□□ -0.43
CLCN6-203ENST00000376490 RNF223E7ERA6 249 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 hCG_2039718K7EN88 272 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 CDC42EP2O14613 210 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 OR4A8P0C604 315 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 OR8G3PP0DMU2 310 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 THBS4P35443 961 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 GPR4P46093 362 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 CTXN1P60606 82 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 MXRA7P84157 204 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 VLDLRP98155 873 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 TOP3AQ13472 1001 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-203ENST00000376490 RAB39AQ14964 217 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 FXNQ16595 210 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 PODNL1Q6PEZ8 512 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 DNM1P46Q6ZS02 220 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 RRM2BQ7LG56 351 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 OAFQ86UD1 273 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 DEFB107AQ8IZN7 70 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 MAPK1IP1LQ8NDC0 245 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 NOXO1Q8NFA2 376 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 IL17RDQ8NFM7 739 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 OR4K5Q8NGD3 323 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 OR13C2Q8NGS9 318 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 SLC7A13Q8TCU3 470 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 NANOS1Q8WY41 292 aaKnown RBP12.35□□□□□ -0.43
CLCN6-203ENST00000376490 HDAC2Q92769 488 aaKnown RBP12.35□□□□□ -0.43
CLCN6-203ENST00000376490 BARX1Q9HBU1 254 aaPredicted RBP12.35□□□□□ -0.43
CLCN6-203ENST00000376490 SAMD4AQ9UPU9 718 aaKnown RBP12.35□□□□□ -0.43
CLCN6-203ENST00000376490 PMF1-BGLAPU3KQ54 211 aa12.35□□□□□ -0.43
CLCN6-203ENST00000376490 ZANQ9Y493 2812 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 B2RBV5 119 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 CENPBD1B2RD01 187 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 H7C417 338 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 LY6HO94772 140 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 UBL3O95164 117 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 SLC2A10O95528 541 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 RAB36O95755 333 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 FAM107AO95990 144 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 H1F0P07305 194 aaKnown RBP12.34□□□□□ -0.43
CLCN6-203ENST00000376490 BMP4P12644 408 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 RHCEP18577 417 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 ZNF84P51523 738 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 NUDT6P53370 316 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 RPL27P61353 136 aaKnown RBP12.34□□□□□ -0.43
CLCN6-203ENST00000376490 FMODQ06828 376 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 KRT72Q14CN4 511 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 IQCCQ4KMZ1 466 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 SAMD4BQ5PRF9 694 aaKnown RBP12.34□□□□□ -0.43
CLCN6-203ENST00000376490 GKAP1Q5VSY0 366 aaPredicted RBP12.34□□□□□ -0.43
CLCN6-203ENST00000376490 KRT80Q6KB66 452 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 C16orf89Q6UX73 402 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 TMPRSS11FQ6ZWK6 438 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 CLDN22Q8N7P3 220 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 NUP37Q8NFH4 326 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 NMD3Q96D46 503 aaKnown RBP12.34□□□□□ -0.43
CLCN6-203ENST00000376490 PYURFQ96I23 114 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 NSL1Q96IY1 281 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 KCNK17Q96T54 332 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 REG4Q9BYZ8 158 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 ANKRD19PQ9H560 264 aa12.34□□□□□ -0.43
CLCN6-203ENST00000376490 DENND2DQ9H6A0 471 aaPredicted RBP12.34□□□□□ -0.43
CLCN6-203ENST00000376490 NIPBLQ6KC79 2804 aaeCLIP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms