RNA–Protein interactions for RNA: ENST00000375608.7

MCF2L-204, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 3,648 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-204ENST00000375608 STOML3Q8TAV4 291 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 PPP1R1CQ8WVI7 109 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SLC22A18Q96BI1 424 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 DNTTIP1Q9H147 329 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 LDAHQ9H6V9 325 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 C19orf53Q9UNZ5 99 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SOX1O00570 391 aaPredicted RBP12.54□□□□□ -0.4
MCF2L-204ENST00000375608 RNGTTO60942 597 aaKnown RBP12.54□□□□□ -0.4
MCF2L-204ENST00000375608 UBBP0CG47 229 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 UBCP0CG48 685 aaKnown RBP12.54□□□□□ -0.4
MCF2L-204ENST00000375608 CTSEP14091 401 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 MRPS10P82664 201 aaKnown RBP12.54□□□□□ -0.4
MCF2L-204ENST00000375608 FZD5Q13467 585 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SLC9A3R2Q15599 337 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 HLA-DQA1Q5Y7H0 255 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 PXKQ7Z7A4 578 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 PM20D2Q8IYS1 436 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 NAXEQ8NCW5 288 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 OR5M9Q8NGP3 310 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 OR4C3Q8NH37 302 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 TMEM41AQ96HV5 264 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 DGAT2Q96PD7 388 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 CES1P1Q9UKY3 287 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 PCDHB10Q9UN67 800 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 ARPC4-TTLL3A0A0A6YYG9 625 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 GGT3PA6NGU5 568 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 TRIM77I1YAP6 450 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 TXNL1O43396 289 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SGCEO43556 437 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SLC16A7O60669 478 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 EML2O95834 649 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SCGB1D2O95969 90 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 CDKN2AP42771 156 aaKnown RBP12.54□□□□□ -0.4
MCF2L-204ENST00000375608 ACTBP60709 375 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 ACTG1P63261 375 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 ARFRP1Q13795 201 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 KRBOX4Q5JUW0 171 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SPACA5Q96QH8 159 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 ZFYVE21Q9BQ24 234 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 SMIM3Q9BZL3 60 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 KCNG2Q9UJ96 466 aa12.54□□□□□ -0.4
MCF2L-204ENST00000375608 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 LDOC1O95751 146 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 CD53P19397 219 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 ZNF585AQ6P3V2 769 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 ADAMTSL4Q6UY14 1074 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 GABRG1Q8N1C3 465 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 SYS1Q8N2H4 156 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 FGF11Q92914 225 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 GIMAP5Q96F15 307 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 MRPS33Q9Y291 106 aaKnown RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 TMEM200CA6NKL6 621 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 SNRPGP15A8MWD9 76 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 B3GALNT1O75752 331 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 NGFRP08138 427 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 RBM34P42696 430 aaKnown RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 HTRA4P83105 476 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 ILF3Q12906 894 aaKnown RBP eCLIP12.53□□□□□ -0.41e-6■■■■□ 19.7
MCF2L-204ENST00000375608 SNTB1Q13884 538 aaKnown RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 LCN10Q6JVE6 187 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 SPRED2Q7Z698 418 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 TMEM52Q8NDY8 209 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 OR52H1Q8NGJ2 320 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 MARVELD3Q96A59 401 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 ZC3H10Q96K80 434 aaKnown RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 TIMP4Q99727 224 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 CMSS1Q9BQ75 279 aaKnown RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 POLMQ9NP87 494 aaPredicted RBP12.53□□□□□ -0.4
MCF2L-204ENST00000375608 STEAP1Q9UHE8 339 aa12.53□□□□□ -0.4
MCF2L-204ENST00000375608 HRKO00198 91 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 GLSO94925 669 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-204ENST00000375608 HTR3BO95264 441 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 THBS1P07996 1170 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 ZNF823P16415 610 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 ATP1B3P54709 279 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 GPR18Q14330 331 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 FAM76BQ5HYJ3 339 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 OR2W3Q7Z3T1 314 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 SPICQ8N5J4 248 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 SLC25A28Q96A46 364 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 CMBLQ96DG6 245 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 MMABQ96EY8 250 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-204ENST00000375608 INTS14Q96SY0 518 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 ADOQ96SZ5 270 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 NRSN2Q9GZP1 204 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 PITHD1Q9GZP4 211 aaPredicted RBP12.52□□□□□ -0.4
MCF2L-204ENST00000375608 EMC3Q9P0I2 261 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 FAM96BQ9Y3D0 163 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 CLDN4O14493 209 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 OGG1O15527 345 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 ZNF208O43345 1280 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 GLCEO94923 617 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 APODP05090 189 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 DPP4P27487 766 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 GDI1P31150 447 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 PRMT2P55345 433 aa12.52□□□□□ -0.4
MCF2L-204ENST00000375608 RPS27AP62979 156 aaKnown RBP12.52□□□□□ -0.4
MCF2L-204ENST00000375608 UBA52P62987 128 aaKnown RBP12.52□□□□□ -0.4
MCF2L-204ENST00000375608 STPG1Q5TH74 334 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms