RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 TMEM119Q4V9L6 283 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SOWAHCQ53LP3 525 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 WDR88Q6ZMY6 472 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LSRQ86X29 649 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LRRC56Q8IYG6 542 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OR51E1Q8TCB6 317 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ASB13Q8WXK3 278 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PYURFQ96I23 114 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SPANXDQ9BXN6 97 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GSX2Q9BZM3 304 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RDH14Q9HBH5 336 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GJB4Q9NTQ9 266 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OR5AC2Q9NZP5 309 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 B4GALT7Q9UBV7 327 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RAXQ9Y2V3 346 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SPTAN1Q13813 2472 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PPM1DO15297 605 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LIASO43766 372 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HBP1O60381 514 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SLC25A14O95258 325 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GYPAP02724 150 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 FUCA1P04066 466 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SOD3P08294 240 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GPR17Q13304 367 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 BSXQ3C1V8 233 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SNAI3Q3KNW1 292 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 KHDC1Q4VXA5 237 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PRAMEF6Q5VXH4 476 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LRRC55Q6ZSA7 311 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LRRC18Q8N456 261 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 MTMR14Q8NCE2 650 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 OR5AK2Q8NH90 309 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 APOBEC4Q8WW27 367 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TMEM106AQ96A25 262 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 MRPL24Q96A35 216 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 R3HDM4Q96D70 268 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SLC38A3Q99624 504 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TKTL2Q9H0I9 626 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 FKBP11Q9NYL4 201 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RNF181Q9P0P0 153 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 UQCR10Q9UDW1 63 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GABRQQ9UN88 632 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 USP22Q9UPT9 525 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CLDN16Q9Y5I7 305 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 FAM205AQ6ZU69 1335 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 NSG1A0A0A6YYJ2 146 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TRAV41A0A0B4J266 112 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HIDE1A8MVS5 230 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GLI1P08151 1106 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 MRPL3P09001 348 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 NSG1P42857 185 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SNU13P55769 128 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GTF2BQ00403 316 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 POU3F1Q03052 451 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GPNMBQ14956 572 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 PARS2Q7L3T8 475 aaKnown RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TBC1D26Q86UD7 250 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 LGI3Q8N145 548 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 RAB40AQ8WXH6 277 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 CNTNAP5Q8WYK1 1306 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 TRIB3Q96RU7 358 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SSBP4Q9BWG4 385 aaPredicted RBP5.54□□□□□ -1.52
SCN2A-202ENST00000375427 SYNPO2LQ9H987 977 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 GIMAP2Q9UG22 337 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 HHLA2Q9UM44 414 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ENPP4Q9Y6X5 453 aa5.54□□□□□ -1.52
SCN2A-202ENST00000375427 ALOX15BO15296 676 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 PNMTP11086 282 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 TUBP50607 506 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 MLLT11Q13015 90 aaPredicted RBP5.53□□□□□ -1.52
SCN2A-202ENST00000375427 VEZF1Q14119 521 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 KHDC1LQ5JSQ8 128 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF626Q68DY1 528 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 OPN5Q6U736 354 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 SCIMPQ6UWF3 145 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 APOOLQ6UXV4 268 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 ZNF417Q8TAU3 575 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 CELF1Q92879 486 aaKnown RBP5.53□□□□□ -1.52
SCN2A-202ENST00000375427 NEU1Q99519 415 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 OXSMQ9NWU1 459 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 ERVW-1Q9UQF0 538 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 NFS1Q9Y697 457 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 ZNFX1Q9P2E3 1918 aaKnown RBP5.53□□□□□ -1.52
SCN2A-202ENST00000375427 PLCH2O75038 1416 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 KDM4FA0A1W2PPD8 638 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 FAM170BA6NMN3 283 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 CDX4O14627 284 aaPredicted RBP5.53□□□□□ -1.52
SCN2A-202ENST00000375427 MOSPD3O75425 235 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 APOC2P02655 101 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 FGF4P08620 206 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 GOT1P17174 413 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 IL2RGP31785 369 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 HSPA7P48741 367 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 CDKN1CP49918 316 aaPredicted RBP5.53□□□□□ -1.52
SCN2A-202ENST00000375427 RAB38P57729 211 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 PROX2Q3B8N5 592 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 S100A7L2Q5SY68 101 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 FAM183BPQ6ZVS7 135 aa5.53□□□□□ -1.52
SCN2A-202ENST00000375427 MS4A5Q9H3V2 200 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms