RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 RPS27P42677 84 aaKnown RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 FAM53BQ14153 422 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 STK11Q15831 433 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 NNATQ16517 81 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 LRRC37A5PQ49AS3 106 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 DPY19L2P2Q6ZN68 376 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 RNF44Q7L0R7 432 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 LINC00518Q8N0U6 118 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 OR6N1Q8NGY5 312 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 LRFN5Q96NI6 719 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM185BQ9H7F4 350 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 APMAPQ9HDC9 416 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 TAS2R8Q9NYW2 309 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 FRRS1LQ9P0K9 344 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ARID1BQ8NFD5 2236 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 URADA6NGE7 173 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 GGT3PA6NGU5 568 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 TVP23AA6NH52 213 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 TPPPO94811 219 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 AKAIN1P0CW23 69 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 RPA2P15927 270 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 AKR1D1P51857 326 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 PRICKLE4Q2TBC4 344 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 SLC35D3Q5M8T2 416 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 JAZF1Q86VZ6 243 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 EIF4E3Q8N5X7 224 aaKnown RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 FOXQ1Q9C009 403 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 SRA1Q9HD15 236 aaKnown RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF230Q9UIE0 474 aaPredicted RBP10.08□□□□□ -0.8
CCDC40-203ENST00000374877 SPACA6W5XKT8 324 aa10.08□□□□□ -0.8
CCDC40-203ENST00000374877 XIRP2A4UGR9 3374 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 A0A087WV62 115 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF10P21506 573 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 MST1P26927 711 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 YPEL5P62699 121 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 ATXN7L3Q14CW9 347 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 BEX5Q5H9J7 111 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 LRRTM1Q86UE6 522 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 SLC43A2Q8N370 569 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 OR51A4Q8NGJ6 313 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 FAM174AQ8TBP5 190 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 NT5CQ8TCD5 201 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 OR2A5Q96R48 311 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 SLC25A32Q9H2D1 315 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 TBC1D29Q9UFV1 150 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 MRM2Q9UI43 246 aaKnown RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 USP34Q70CQ2 3546 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 A0A1B0GTQ1 180 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 RFPL4AA6NLU0 287 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 RFPL4AL1F8VTS6 287 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 OR10H2O60403 315 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 GPR75O95800 540 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 MNDAP41218 407 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 CDKN2AP42771 156 aaKnown RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 NFATC4Q14934 902 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 SLC6A19Q695T7 634 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 BEST3Q8N1M1 668 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 RNF166Q96A37 237 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 CCDC74AQ96AQ1 378 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 POFUT1Q9H488 388 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 STEAP1Q9UHE8 339 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 H7C1C5 153 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 SLC31A1O15431 190 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 CTAG2O75638 210 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 GPR143P51810 404 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 LUMP51884 338 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 LCN6P62502 163 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 PDSS1Q5T2R2 415 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 LINC01590Q5TEZ4 76 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 ABHD13Q7L211 337 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 BPIFCQ8NFQ6 507 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 NKX6-2Q9C056 277 aaPredicted RBP10.07□□□□□ -0.8
CCDC40-203ENST00000374877 KIR3DX1Q9H7L2 352 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 FGF22Q9HCT0 170 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 PRELID3BQ9Y3B1 194 aa10.07□□□□□ -0.8
CCDC40-203ENST00000374877 PRR19A6NJB7 356 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 PRAMEF26H0Y7S4 382 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 TNFRSF10CO14798 259 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 UPK3AO75631 287 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 UBBP0CG47 229 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 UBCP0CG48 685 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 PRSS3P35030 304 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 AQP2P41181 271 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 POU3F4P49335 361 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 PGDP52209 483 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 RPS27AP62979 156 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 UBA52P62987 128 aaKnown RBP10.06□□□□□ -0.8
CCDC40-203ENST00000374877 STEAP1BQ6NZ63 245 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZCCHC12Q6PEW1 402 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 DGAT2L6Q6ZPD8 337 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 OR6N2Q8NGY6 317 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 RPS4Y2Q8TD47 263 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 COMMD4Q9H0A8 199 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 GTF2A1LQ9UNN4 478 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 CYP8B1Q9UNU6 501 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 ZNF175Q9Y473 711 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 TRAV14DV4A0A0A6YYC5 116 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 RAD1O60671 282 aa10.06□□□□□ -0.8
CCDC40-203ENST00000374877 TMEM127O75204 238 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms