RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 CPZQ66K79 652 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 OR2A2Q6IF42 318 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ESPNLQ6ZVH7 1005 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 DCBLD1Q8N8Z6 715 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 FAM110BQ8TC76 370 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 UBASH3BQ8TF42 649 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 MOCOSQ96EN8 888 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 NLE1Q9NVX2 485 aaPredicted RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 MED9Q9NWA0 146 aa7.2□□□□□ -1.26
USP48-203ENST00000374732 FCF1Q9Y324 198 aaKnown RBP7.2□□□□□ -1.26
USP48-203ENST00000374732 EFCAB9A8MZ26 197 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 GPR31O00270 319 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ENSAO43768 121 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 PPIAL4GP0DN37 164 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 FOLR2P14207 255 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 MMP9P14780 707 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 NPPBP16860 134 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ZNF14P17017 642 aaPredicted RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 SDC4P31431 198 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 UQCRFS1P47985 274 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 UCNP55089 124 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 RHOAP61586 193 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TAF13Q15543 124 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 PRTGQ2VWP7 1150 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 PLPPR5Q32ZL2 321 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TMEM198Q66K66 360 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 AADACL2Q6P093 401 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 DLK2Q6UY11 383 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 GABRG1Q8N1C3 465 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 FBXO25Q8TCJ0 367 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 DNASE2BQ8WZ79 361 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ORAI1Q96D31 301 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 CXorf40BQ96DE9 158 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 PIK3IP1Q96FE7 263 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TRMT61AQ96FX7 289 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 TMEM19Q96HH6 336 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 RBP7Q96R05 134 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 RBM15Q96T37 977 aaKnown RBP eCLIP7.19□□□□□ -1.263e-6■■■■□ 24.3
USP48-203ENST00000374732 DUSP16Q9BY84 665 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 LHPPQ9H008 270 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 HEXA-AS1Q9H8Q6 139 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 RASL12Q9NYN1 266 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 FAM240BA0A1B0GVZ2 78 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TCRBV5S1A1TA0A578 114 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TFP02787 698 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 EDN1P05305 212 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 GLUD2P49448 558 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ERVK11-1P61568 191 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ST3GAL4Q11206 333 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 UBE2V1Q13404 147 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 EIF4HQ15056 248 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 CTSL3PQ5NE16 218 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TPRG1LQ5T0D9 272 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 DOK6Q6PKX4 331 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 GADL1Q6ZQY3 521 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ADAT2Q7Z6V5 191 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 LDLRAD3Q86YD5 345 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 CMTM1Q8IZ96 169 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 C8orf59Q8N0T1 100 aaPredicted RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 OR10D4PQ8NGN7 298 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 WDR34Q96EX3 536 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 WDR89Q96FK6 387 aaPredicted RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 RAX2Q96IS3 184 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 OR52E6Q96RD3 313 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 JMJD8Q96S16 334 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TP53RKQ96S44 253 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ZNF436Q9C0F3 470 aaPredicted RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 NXF2Q9GZY0 626 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 LRRC4CQ9HCJ2 640 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 SLC2A8Q9NY64 477 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 FRRS1LQ9P0K9 344 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 RAB22AQ9UL26 194 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 PLAGL1Q9UM63 463 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 PSG8Q9UQ74 426 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 K7EN84 100 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 DXOO77932 396 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 S1PR2O95136 353 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ABHD16AO95870 558 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 GSK3BP49841 420 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TAS2R38P59533 333 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 TPI1P60174 286 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 MS4A2Q01362 244 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 C4orf48Q5BLP8 95 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 LRRC28Q86X40 367 aaPredicted RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 MS4A15Q8N5U1 240 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 OR2I1PQ8NGU4 316 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 OR2M4Q96R27 311 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 THTPAQ9BU02 230 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 QTRT1Q9BXR0 403 aaKnown RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 KCNK15Q9H427 330 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 METTL17Q9H7H0 456 aaPredicted RBP7.19□□□□□ -1.26
USP48-203ENST00000374732 WDR45Q9Y484 360 aa7.19□□□□□ -1.26
USP48-203ENST00000374732 ANK1P16157 1881 aa7.18□□□□□ -1.26
USP48-203ENST00000374732 IQCMA0A1B0GVH7 501 aa7.18□□□□□ -1.26
USP48-203ENST00000374732 TCRBV7S2A1N4TA0A589 114 aa7.18□□□□□ -1.26
USP48-203ENST00000374732 FAM90A20PA6NIJ5 464 aa7.18□□□□□ -1.26
USP48-203ENST00000374732 C19orf67A6NJJ6 358 aa7.18□□□□□ -1.26
USP48-203ENST00000374732 G3V3Y1 287 aa7.18□□□□□ -1.26
USP48-203ENST00000374732 GAPDHP04406 335 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms