RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 ZNF248Q8NDW4 579 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 OR10G3Q8NGC4 313 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 OR51D1Q8NGF3 324 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 OR52I2Q8NH67 350 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 MED28Q9H204 178 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 ITGB1BP2Q9UKP3 347 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 CDV3Q9UKY7 258 aaKnown RBP10.61□□□□□ -0.71
PDE6C-201ENST00000371447 RARRES3Q9UL19 164 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 B9D1Q9UPM9 204 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 V9GY05 133 aa10.61□□□□□ -0.71
PDE6C-201ENST00000371447 GVINP1Q7Z2Y8 2422 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 TRAV36DV7A0A075B6V5 113 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 OGG1O15527 345 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 GDNFP39905 211 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 ALKBH1Q13686 389 aaKnown RBP10.6□□□□□ -0.71
PDE6C-201ENST00000371447 EIF2B1Q14232 305 aaKnown RBP10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SHBQ15464 509 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 BTBD16Q32M84 506 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 TMEM69Q5SWH9 247 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 OR10K2Q6IF99 312 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 NOXA1Q86UR1 476 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 TPRA1Q86W33 373 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 C17orf82Q86X59 251 aaPredicted RBP10.6□□□□□ -0.71
PDE6C-201ENST00000371447 COMMD2Q86X83 199 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 GRPEL2Q8TAA5 225 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SUN5Q8TC36 379 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 CCDC74BQ96LY2 380 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 GFI1Q99684 422 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SLITRK2Q9H156 845 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 CHRDQ9H2X0 955 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 IFITM5A6NNB3 132 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 H3BMH7 237 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 GMDSO60547 372 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 TSPAN2O60636 221 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 TSPAN9O75954 239 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SLC2A1P11166 492 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 S100A1P23297 94 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 STK11Q15831 433 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 Q5BKY6 102 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SLITRK4Q8IW52 837 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 WDFY1Q8IWB7 410 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SYS1Q8N2H4 156 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 OR2G2Q8NGZ5 317 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 MSANTD3Q96H12 275 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 MS4A3Q96HJ5 214 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SLC41A2Q96JW4 573 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 KLHL15Q96M94 604 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 DDOQ99489 341 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 POLR1DQ9Y2S0 133 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 MN1Q10571 1320 aaPredicted RBP10.6□□□□□ -0.71
PDE6C-201ENST00000371447 RALGAPA1Q6GYQ0 2036 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 BDP1A6H8Y1 2624 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 ALG1L2C9J202 215 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 K7ESF4 209 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 PNPP00491 289 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 CSN2P05814 226 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 UCHL1P09936 223 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 ADRA2CP18825 462 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 INSM1Q01101 510 aaPredicted RBP10.6□□□□□ -0.71
PDE6C-201ENST00000371447 TLE3Q04726 772 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 FOXF1Q12946 379 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 FAM69AQ5T7M9 428 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 PYHIN1Q6K0P9 492 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 STAC2Q6ZMT1 411 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 COX15Q7KZN9 410 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 RNF170Q96K19 258 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 SOSTQ9BQB4 213 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 NMNAT2Q9BZQ4 307 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 COMMD4Q9H0A8 199 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 WNT16Q9UBV4 365 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 CGGBP1Q9UFW8 167 aaPredicted RBP10.6□□□□□ -0.71
PDE6C-201ENST00000371447 EMC9Q9Y3B6 208 aa10.6□□□□□ -0.71
PDE6C-201ENST00000371447 NPIPA5E9PKD4 350 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 MTRF1O75570 445 aaKnown RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 ITGA10O75578 1167 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 CCL4P13236 92 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 RBMS1P29558 406 aaKnown RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 P2RX1P51575 399 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 CAMK2DQ13557 499 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 WDR38Q5JTN6 314 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 LUZP2Q86TE4 346 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 YIPF5Q969M3 257 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 MRPL48Q96GC5 212 aaKnown RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 NPIPA1Q9UND3 350 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 LOC100509620A0A075B734 347 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 BLACEA4D250 179 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 C10orf142B7Z368 130 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 UPK3AO75631 287 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 SC5DO75845 299 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 KDM4BO94953 1096 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 CFL1P23528 166 aaKnown RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 UQCRC1P31930 480 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 POLR2HP52434 150 aaKnown RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 MFGE8Q08431 387 aaPredicted RBP10.59□□□□□ -0.71
PDE6C-201ENST00000371447 SPOCK1Q08629 439 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 COL19A1Q14993 1142 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 TRAM1Q15629 374 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 TMEM255AQ5JRV8 349 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 FAM209AQ5JX71 171 aa10.59□□□□□ -0.71
PDE6C-201ENST00000371447 NDUFAF7Q7L592 441 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms