RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 SLC6A18Q96N87 628 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 C12orf10Q9HB07 376 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 GIPRP48546 466 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 SYPL1Q16563 259 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 MBOAT2Q6ZWT7 520 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 C1orf87Q8N0U7 546 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 OR2T11Q8NH01 316 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 ABHD4Q8TB40 342 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 SLC38A5Q8WUX1 472 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 SFT2D1Q8WV19 159 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 MARC2Q969Z3 335 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 TMEM106AQ96A25 262 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 PLK3Q9H4B4 646 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 KIR2DS5A0A0G2JLQ3 304 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 A0A0G2JNG1 304 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 H7C1C5 153 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 KIR2DS3K7RE56 304 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 ALDOCP09972 364 aaKnown RBP11.54□□□□□ -0.56
HCFC1-202ENST00000369984 ZNF17P17021 662 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 LCN6P62502 163 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 KIR2DS5Q14953 304 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 PNPLA1Q8N8W4 532 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 SMAD6O43541 496 aaKnown RBP11.54□□□□□ -0.56
HCFC1-202ENST00000369984 NXPH2O95156 264 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 HAPLN2Q9GZV7 340 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 ARNT2Q9HBZ2 717 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 SRPK3Q9UPE1 567 aa11.54□□□□□ -0.56
HCFC1-202ENST00000369984 H7BYZ3 331 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 ARNTLO00327 626 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 UBL3O95164 117 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 ZNF93P35789 620 aaPredicted RBP11.53□□□□□ -0.56
HCFC1-202ENST00000369984 SPRED3Q2MJR0 410 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 PIANPQ8IYJ0 282 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 BPIFCQ8NFQ6 507 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 IL23AQ9NPF7 189 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 NAGAP17050 411 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 IVDP26440 423 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 CBARPQ8N350 705 aaPredicted RBP11.53□□□□□ -0.56
HCFC1-202ENST00000369984 SLC22A24Q8N4F4 322 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 CELF2-AS1Q8N7Q2 184 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 BADQ92934 168 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 PSMB5P28074 263 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 SLC1A3P43003 542 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 C1orf220Q5T0J3 134 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 KCNRGQ8N5I3 272 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 KCNG3Q8TAE7 436 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 C10orf90Q96M02 699 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 NKX6-2Q9C056 277 aaPredicted RBP11.53□□□□□ -0.56
HCFC1-202ENST00000369984 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
HCFC1-202ENST00000369984 MOKQ9UQ07 419 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 GPRIN2O60269 458 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 AIFM1O95831 613 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 CD46P15529 392 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 HOXA11P31270 313 aaPredicted RBP11.53□□□□□ -0.56
HCFC1-202ENST00000369984 TMEM176BQ3YBM2 270 aaPredicted RBP11.53□□□□□ -0.56
HCFC1-202ENST00000369984 ADAM5Q6NVV9 412 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 ERVMER34-1Q9H9K5 563 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 AOAHP28039 575 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 PRLHRP49683 370 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 SLC24A4Q8NFF2 622 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 SSUH2Q9Y2M2 353 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 ARSAP15289 507 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 CLDN10P78369 228 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 TREX1Q9NSU2 369 aa11.53□□□□□ -0.56
HCFC1-202ENST00000369984 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 F10P00742 488 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 ADH4P08319 380 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 GLYATL3Q5SZD4 288 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 LRRTM1Q86UE6 522 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 LINC00597Q9H2U6 94 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 SLC2A9Q9NRM0 540 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 PIGLQ9Y2B2 252 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 NOSIPQ9Y314 301 aaKnown RBP11.52□□□□□ -0.56
HCFC1-202ENST00000369984 YTHDF2Q9Y5A9 579 aaKnown RBP11.52□□□□□ -0.56
HCFC1-202ENST00000369984 TO15178 435 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 HTR1FP30939 366 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 RABEPKQ7Z6M1 372 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 OR10J5Q8NHC4 309 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 OR14A16Q8NHC5 309 aa11.52□□□□□ -0.56
HCFC1-202ENST00000369984 WDR83Q9BRX9 315 aaKnown RBP11.52□□□□□ -0.56
HCFC1-202ENST00000369984 NAA50Q9GZZ1 169 aaKnown RBP11.52□□□□□ -0.56
HCFC1-202ENST00000369984 GJB3O75712 270 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 TCRBP04435 133 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 MTHFD2P13995 350 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 KHDC1LQ5JSQ8 128 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 SLC35G3Q8N808 338 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 RHBDD1Q8TEB9 315 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 NDFIP1Q9BT67 221 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 EMCNQ9ULC0 261 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 UGT2A1Q9Y4X1 527 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 PRSS21Q9Y6M0 314 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 ZNF816-ZNF321PA0A0X1KG74 233 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 KIAA1324LA8MWY0 1029 aaPredicted RBP11.52□□□□□ -0.57
HCFC1-202ENST00000369984 M0QYG6 137 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 PMS2P2O95744 297 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 CT45A10P0DMU9 189 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 SHC1P29353 583 aa11.52□□□□□ -0.57
HCFC1-202ENST00000369984 DCAF7P61962 342 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms