RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 SLC25A36Q96CQ1 311 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 DOK1Q99704 481 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 TIMP4Q99727 224 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 NPAS1Q99742 590 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 SMR3AQ99954 134 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 OR11A1Q9GZK7 315 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 OR51V1Q9H2C8 321 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 FN3KQ9H479 309 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 C12orf10Q9HB07 376 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 NANSQ9NR45 359 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 CMC2Q9NRP2 79 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 ZNF629Q9UEG4 869 aaPredicted RBP8.89□□□□□ -0.99
TPM3-210ENST00000368530 ENPP5Q9UJA9 477 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 BAIAP2Q9UQB8 552 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 ERGIC3Q9Y282 383 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 ADAM18Q9Y3Q7 739 aa8.89□□□□□ -0.99
TPM3-210ENST00000368530 TRAV36DV7A0A075B6V5 113 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 A0A1W2PPR1 153 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 AHRRA9YTQ3 701 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 MYL12BO14950 172 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 IFNGP01579 166 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 HIST1H2ABP04908 130 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 GYPBP06028 91 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 CLUP10909 449 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ZNF3P17036 446 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 BMP5P22003 454 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 HTR1FP30939 366 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ATP6V1E1P36543 226 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ASCL1P50553 236 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.88□□□□□ -0.99
TPM3-210ENST00000368530 RAB40BQ12829 278 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 FOXF1Q12946 379 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ITGADQ13349 1161 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 AQP6Q13520 282 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 TSTQ16762 297 aaKnown RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 TMEM44Q2T9K0 475 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 MEPCEQ7L2J0 689 aaKnown RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 HIST3H2AQ7L7L0 130 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 GRINAQ7Z429 371 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 NANOGNBQ7Z5D8 188 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ADGRG3Q86Y34 549 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ANKRD13BQ86YJ7 626 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 ERI1Q8IV48 349 aaKnown RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 SLC37A3Q8NCC5 494 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 OR51G2Q8NGK0 314 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 OR9Q1Q8NGQ5 310 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 RPL3LQ92901 407 aaKnown RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 HIST1H2ACQ93077 130 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 RASD2Q96D21 266 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 KATNB1Q9BVA0 655 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 MND1Q9BWT6 205 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 PRDM14Q9GZV8 571 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 JKAMPQ9P055 326 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 SEC14L4Q9UDX3 406 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 BOKQ9UMX3 212 aaPredicted RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 DIMT1Q9UNQ2 313 aaKnown RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 WIF1Q9Y5W5 379 aa8.88□□□□□ -0.99
TPM3-210ENST00000368530 NSD1Q96L73 2696 aaPredicted RBP8.88□□□□□ -0.99
TPM3-210ENST00000368530 IRGMA1A4Y4 181 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 TP53I11O14683 189 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 IMPA2O14732 288 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 BGLAPP02818 100 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 F13BP05160 661 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 HPNP05981 417 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 MRPL3P09001 348 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 ASAH2BP0C7U1 165 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 EPXP11678 715 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 PEPDP12955 493 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 HIST1H1CP16403 213 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 PRKCAP17252 672 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 MYL12AP19105 171 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 GADD45AP24522 165 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 CASP3P42574 277 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 ZNF41P51814 821 aaPredicted RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 SUMO3P55854 103 aaPredicted RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 RPS4XP62701 263 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 RPL18Q07020 188 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 LSAMPQ13449 338 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 SPCS2Q15005 226 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 CTF1Q16619 201 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 DEFB113Q30KQ7 82 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 C1orf140Q5VVS0 124 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 VASNQ6EMK4 673 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 DPY19L2P2Q6ZN68 376 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 GID4Q8IVV7 300 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 DND1Q8IYX4 353 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 NANOGP1Q8N7R0 232 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 OR4K17Q8NGC6 315 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 RNF138Q8WVD3 245 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 TMEM234Q8WY98 164 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 PTP4A1Q93096 173 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 TBX5Q99593 518 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 MGLLQ99685 303 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 EXO5Q9H790 373 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 FGF20Q9NP95 211 aaPredicted RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 SDHAF3Q9NRP4 125 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 MRPS18AQ9NVS2 196 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 CHCHD3Q9NX63 227 aaKnown RBP8.87□□□□□ -0.99
TPM3-210ENST00000368530 CHRNA9Q9UGM1 479 aa8.87□□□□□ -0.99
TPM3-210ENST00000368530 FBXL2Q9UKC9 423 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms