RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MS4A3Q96HJ5 214 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 CCT8L2Q96SF2 557 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 KCNS3Q9BQ31 491 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 TXNIPQ9H3M7 391 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 ANKRD19PQ9H560 264 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 NMNAT1Q9HAN9 279 aaPredicted RBP16.42■□□□□ 0.22
CKS1B-203ENST00000368439 TMEM38BQ9NVV0 291 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 NDUFAF4Q9P032 175 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 TLN2Q9Y4G6 2542 aa16.42■□□□□ 0.22
CKS1B-203ENST00000368439 CSPG4Q6UVK1 2322 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 LY6G6DO95868 133 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 SEMG1P04279 462 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 CD79AP11912 226 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 DAP3P51398 398 aaKnown RBP16.41■□□□□ 0.22
CKS1B-203ENST00000368439 PIGFQ07326 219 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 ALG10Q5BKT4 473 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 MBOAT2Q6ZWT7 520 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 SLC22A24Q8N4F4 322 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 FITM2Q8N6M3 262 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 OR4F15Q8NGB8 312 aa16.41■□□□□ 0.22
CKS1B-203ENST00000368439 HDAC2Q92769 488 aaKnown RBP16.41■□□□□ 0.22
CKS1B-203ENST00000368439 DENND2DQ9H6A0 471 aaPredicted RBP16.41■□□□□ 0.22
CKS1B-203ENST00000368439 BARX1Q9HBU1 254 aaPredicted RBP16.41■□□□□ 0.22
CKS1B-203ENST00000368439 SAMD4AQ9UPU9 718 aaKnown RBP16.41■□□□□ 0.22
CKS1B-203ENST00000368439 CHD3Q12873 2000 aaKnown RBP16.4■□□□□ 0.22
CKS1B-203ENST00000368439 TRAV27A0A087WT01 109 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 CDC42EP2O14613 210 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 PDE5AO76074 875 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 IGHMP01871 453 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 HEXAP06865 529 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 PATE4P0C8F1 98 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 ZNF35P13682 527 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 TCN1P20061 433 aaPredicted RBP16.4■□□□□ 0.22
CKS1B-203ENST00000368439 GIPRP48546 466 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 CLRN1P58418 232 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 RAB1AP62820 205 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 VLDLRP98155 873 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 MYBPC1Q00872 1141 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 EFNB3Q15768 340 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 C10orf128Q5T292 105 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 CLEC9AQ6UXN8 241 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 TMPRSS11FQ6ZWK6 438 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 Q71RC1 249 aaPredicted RBP16.4■□□□□ 0.22
CKS1B-203ENST00000368439 ZNF584Q8IVC4 421 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 SYT14Q8NB59 555 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 IL17RDQ8NFM7 739 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 SLC7A13Q8TCU3 470 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 NANOS1Q8WY41 292 aaKnown RBP16.4■□□□□ 0.22
CKS1B-203ENST00000368439 HTRA1Q92743 480 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 FBXO17Q96EF6 278 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 TNFRSF13CQ96RJ3 184 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 KCNK17Q96T54 332 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 CDRT15Q96T59 188 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 ZNF442Q9H7R0 627 aa16.4■□□□□ 0.22
CKS1B-203ENST00000368439 IGKV1D-43A0A0B4J1Z2 117 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 A0A1W2PRQ8 180 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 EFCAB9A8MZ26 197 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 MCIDASD6RGH6 385 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 SSX4O60224 188 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 UBL3O95164 117 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 OR8G3PP0DMU2 310 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 ZNF26P17031 533 aaPredicted RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 HOXB4P17483 251 aaPredicted RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 THBS4P35443 961 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 MSX2P35548 267 aaPredicted RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 SERPINF1P36955 418 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 PTDSS1P48651 473 aaKnown RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 CHRNB3Q05901 458 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 DGCR6Q14129 220 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 KRT72Q14CN4 511 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 TAF11Q15544 211 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 ANKDD1AQ495B1 522 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 NRN1LQ496H8 165 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 SAMD4BQ5PRF9 694 aaKnown RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 PODNL1Q6PEZ8 512 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 ZNF730Q6ZMV8 503 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 HDDC2Q7Z4H3 204 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 CYP4Z1Q86W10 505 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 OR13C2Q8NGS9 318 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 OR51A7Q8NH64 312 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 DHRS1Q96LJ7 313 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 SH3GL3Q99963 347 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 FUZQ9BT04 418 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 PLK3Q9H4B4 646 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 FAM53CQ9NYF3 392 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 MAGEL2Q9UJ55 1249 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 ZNF346Q9UL40 294 aaKnown RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 UGT2A1Q9Y4X1 527 aa16.39■□□□□ 0.21
CKS1B-203ENST00000368439 FN1P02751 2386 aaKnown RBP16.39■□□□□ 0.21
CKS1B-203ENST00000368439 RTTNQ86VV8 2226 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 FAM171A2A8MVW0 826 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 RNF223E7ERA6 249 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 DIRAS1O95057 198 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 SLC2A10O95528 541 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 OR4A8P0C604 315 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 SAGP10523 405 aaPredicted RBP16.38■□□□□ 0.21
CKS1B-203ENST00000368439 RHCEP18577 417 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 GPR4P46093 362 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 SLC9A3P48764 834 aa16.38■□□□□ 0.21
CKS1B-203ENST00000368439 CTXN1P60606 82 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms