RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 NANSQ9NR45 359 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 DUSP13Q9UII6 198 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF229Q9UJW7 825 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF346Q9UL40 294 aaKnown RBP13.73□□□□□ -0.21
CKS1B-202ENST00000368436 FZR1Q9UM11 496 aa13.73□□□□□ -0.21
CKS1B-202ENST00000368436 SLC22A23A1A5C7 686 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 DHHO43323 396 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 RNF13O43567 381 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 NAT2P11245 290 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 NRN1LQ496H8 165 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 DPPA2Q7Z7J5 298 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 SLC30A7Q8NEW0 376 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 TSPEARQ8WU66 669 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 TAMM41Q96BW9 452 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 ATP6V1G3Q96LB4 118 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 SH3GL3Q99963 347 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 PRSS27Q9BQR3 290 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF275Q9NSD4 429 aaPredicted RBP13.72□□□□□ -0.21
CKS1B-202ENST00000368436 SLC7A7Q9UM01 511 aa13.72□□□□□ -0.21
CKS1B-202ENST00000368436 A0A1W2PPW3 197 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 FAM157AC9JC47 383 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 WNT9BO14905 357 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 RP2O75695 350 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 NCR1O76036 304 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 FARS2O95363 451 aaKnown RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 TFP02787 698 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 HIST1H2ABP04908 130 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 QDPRP09417 244 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 SAGP10523 405 aaPredicted RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF250P15622 560 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 ITGA2P17301 1181 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 PCGF2P35227 344 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 GZMMP51124 257 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 MELKQ14680 651 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 RGS7BPQ6MZT1 257 aaPredicted RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 TMEM53Q6P2H8 277 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 HIST3H2AQ7L7L0 130 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 GLCCI1Q86VQ1 547 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 PAQR4Q8N4S7 273 aaPredicted RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 OR4K5Q8NGD3 323 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 VANGL1Q8TAA9 524 aaPredicted RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 HIST1H2ACQ93077 130 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 SEPHS2Q99611 448 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 ZNF416Q9BWM5 594 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 MRPL13Q9BYD1 178 aaKnown RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 C1orf198Q9H425 327 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 MEPEQ9NQ76 525 aaPredicted RBP13.71□□□□□ -0.21
CKS1B-202ENST00000368436 METRNQ9UJH8 293 aa13.71□□□□□ -0.21
CKS1B-202ENST00000368436 IGLV3-9A0A075B6K5 115 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 KPNA4O00629 521 aaPredicted RBP13.7□□□□□ -0.22
CKS1B-202ENST00000368436 ANGPT2O15123 496 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 SNAP29O95721 258 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 BCL10O95999 233 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 CLPTM1O96005 669 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 MSMBP08118 114 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 CRYBA2P53672 197 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 LMO4P61968 165 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 TTMPQ5BVD1 217 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 CCDC80Q76M96 950 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 MEX3DQ86XN8 651 aaKnown RBP13.7□□□□□ -0.22
CKS1B-202ENST00000368436 MCHR2Q969V1 340 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 TMEM186Q96B77 213 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 HIF1ANQ9NWT6 349 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 TAAR3PQ9P1P4 343 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 GPR160Q9UJ42 338 aa13.7□□□□□ -0.22
CKS1B-202ENST00000368436 NBEAL1Q6ZS30 2694 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 A0A0A6YYJ9 748 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 C17orf100A8MU93 164 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 CENPBD1B2RD01 187 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 PPIHO43447 177 aaKnown RBP13.69□□□□□ -0.22
CKS1B-202ENST00000368436 MGRN1O60291 552 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 PTHP01270 115 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 IGHG1P01857 330 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 MMP7P09237 267 aaPredicted RBP13.69□□□□□ -0.22
CKS1B-202ENST00000368436 FAM157BP0CG42 384 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 GAAP10253 952 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 CCL2P13500 99 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 MAGEB1P43366 347 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 ZNF133P52736 654 aaPredicted RBP13.69□□□□□ -0.22
CKS1B-202ENST00000368436 RUNX1T1Q06455 604 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 NFYCQ13952 458 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 VMACQ2NL98 169 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 SLC36A2Q495M3 483 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 MMEL1Q495T6 779 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 INTS11Q5TA45 600 aaKnown RBP13.69□□□□□ -0.22
CKS1B-202ENST00000368436 SLC16A14Q7RTX9 510 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 NANOGNBQ7Z5D8 188 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 OR10A6Q8NH74 314 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 ZNF519Q8TB69 540 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 SYNPRQ8TBG9 265 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 SLC26A7Q8TE54 656 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 DYDC1Q8WWB3 177 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 RASSF5Q8WWW0 418 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 ZNF347Q96SE7 839 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 NARFLQ9H6Q4 476 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 RNF121Q9H920 327 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 CDH20Q9HBT6 801 aa13.69□□□□□ -0.22
CKS1B-202ENST00000368436 HINT3Q9NQE9 182 aaKnown RBP13.69□□□□□ -0.22
CKS1B-202ENST00000368436 NKIRAS2Q9NYR9 191 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms