RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 GPR139Q6DWJ6 353 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 LANCL3Q6ZV70 420 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 OR1F2PQ96R84 312 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 MESP1Q9BRJ9 268 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 PLEKHA1Q9HB21 404 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 DLL4Q9NR61 685 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 MEIKINA0A087WXM9 373 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 CALCBP10092 127 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 POU3F3P20264 500 aaPredicted RBP16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 DNASE1P24855 282 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 RAD52P43351 418 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 HNRNPKP61978 463 aaKnown RBP eCLIP16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 WDR38Q5JTN6 314 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 FAM69AQ5T7M9 428 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 MAMSTRQ6ZN01 415 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 OR2T35Q8NGX2 323 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 GPR148Q8TDV2 347 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 KCNK15Q9H427 330 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 ZNF304Q9HCX3 659 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 TRAV36DV7A0A075B6V5 113 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 TCRBV16S1A1N1A0A5B0 115 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 ECDO95905 644 aaPredicted RBP16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 RAB40ALP0C0E4 278 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 GP1BBP13224 206 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 KIR3DL2P43630 455 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 DMWDQ09019 674 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 UBXN2BQ14CS0 331 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 OR51D1Q8NGF3 324 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 OTOSQ8NHW6 89 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 DUSP19Q8WTR2 217 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 RAB40AQ8WXH6 277 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 GPR137Q96N19 417 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 WWTR1Q9GZV5 400 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 NOX3Q9HBY0 568 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 EIF3KQ9UBQ5 218 aaKnown RBP16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 B9D1Q9UPM9 204 aa16.35■□□□□ 0.21
UBQLN4-201ENST00000368309 TSPAN2O60636 221 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 CCKBRP32239 447 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 PER3P56645 1201 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 ARHGAP40Q5TG30 622 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 TSEN15Q8WW01 171 aaKnown RBP16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 PTDSS2Q9BVG9 487 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 SUSD5O60279 629 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 DOK2O60496 412 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 SPARCP09486 303 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 FBLP22087 321 aaKnown RBP16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 EFNB2P52799 333 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 AP3S2P59780 193 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 LINC00303Q3SY05 128 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 LGALSLQ3ZCW2 172 aaPredicted RBP16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 ZBTB37Q5TC79 503 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 MAMDC2Q7Z304 686 aaPredicted RBP16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 MDGA2Q7Z553 956 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 FGD2Q7Z6J4 655 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 FAM174AQ8TBP5 190 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 TMEM14AQ9Y6G1 99 aa16.34■□□□□ 0.21
UBQLN4-201ENST00000368309 ALG1L2C9J202 215 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 OR6A2O95222 327 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 ANXA7P20073 488 aaKnown RBP16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 EGR3Q06889 387 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 MELKQ14680 651 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 SIX5Q8N196 739 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 DAZLQ92904 295 aaKnown RBP16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 DCBLD2Q96PD2 775 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 VN1R1Q9GZP7 353 aa16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 MRPL39Q9NYK5 338 aaKnown RBP16.33■□□□□ 0.21
UBQLN4-201ENST00000368309 IGHV1OR21-1A0A087WYE8 117 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 TMED7-TICAM2A0A0A6YYA0 188 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 ANKRD20A5PA0PJZ0 165 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 TMEM212A6NML5 194 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 PNPP00491 289 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 PGCP20142 388 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 ZNF81P51508 661 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 CBFBQ13951 182 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 OGFOD3Q6PK18 319 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 TEX261Q6UWH6 196 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 OR8H3Q8N146 312 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 THAP3Q8WTV1 239 aaPredicted RBP16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 PCNPQ8WW12 178 aaKnown RBP16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 C4orf45Q96LM5 186 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 COPS7AQ9UBW8 275 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 TMED7Q9Y3B3 224 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 U3KQ87 197 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 PRSS37A4D1T9 235 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 ZNF254O75437 659 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 INSM1Q01101 510 aaPredicted RBP16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 YOD1Q5VVQ6 348 aaPredicted RBP16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 NLRC3Q7RTR2 1065 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 ADGRG3Q86Y34 549 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 SDR16C5Q8N3Y7 309 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 ZNF680Q8NEM1 530 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 DPCDQ9BVM2 203 aaPredicted RBP16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 ZNF436Q9C0F3 470 aaPredicted RBP16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 CTSFQ9UBX1 484 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 PCDHGA5Q9Y5G8 931 aa16.33■□□□□ 0.2
UBQLN4-201ENST00000368309 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.32■□□□□ 0.2
UBQLN4-201ENST00000368309 NOS1APO75052 506 aaPredicted RBP16.32■□□□□ 0.2
UBQLN4-201ENST00000368309 MPZL1O95297 269 aa16.32■□□□□ 0.2
UBQLN4-201ENST00000368309 CTLA4P16410 223 aa16.32■□□□□ 0.2
UBQLN4-201ENST00000368309 OR3A3P47888 321 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms