RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 STEAP1Q9UHE8 339 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FOXD3Q9UJU5 478 aaPredicted RBP7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FBXL2Q9UKC9 423 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 OSGIN2Q9Y236 505 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 URGCP-MRPS24S4R325 110 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 DOCK2Q92608 1830 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 PIRO00625 290 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FABP4P15090 132 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CA5AP35218 305 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 BSGP35613 385 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ASPAP45381 313 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 GDF7Q7Z4P5 450 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 WDR5BQ86VZ2 330 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF383Q8NA42 475 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 NETO2Q8NC67 525 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ADAMTS16Q8TE57 1224 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CHFRQ96EP1 664 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SFRP2Q96HF1 295 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 RHOVQ96L33 236 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 SLC30A3Q99726 388 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 C19orf43Q9BQ61 176 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 DEFB127Q9H1M4 99 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 ACOT13Q9NPJ3 140 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 CLEC4EQ9ULY5 219 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 FBXO7Q9Y3I1 522 aa7.99□□□□□ -1.13
SYNE1-206ENST00000367253 C21orf140B9A014 251 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 NPY1RP25929 384 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 PYCR1P32322 319 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 POU3F4P49335 361 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 RRAS2P62070 204 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 NHLH2Q02577 135 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SLAMF1Q13291 335 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 RANBP10Q6VN20 620 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 PLPP5Q8NEB5 264 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 OR10K1Q8NGX5 313 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SLC25A43Q8WUT9 341 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 FOXRED1Q96CU9 486 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 MYADMQ96S97 322 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 TSPAN10Q9H1Z9 355 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SIX4Q9UIU6 781 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 K7EQM0 130 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 M0QZQ0 153 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SLC1A7O00341 560 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CD48P09326 243 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CD1BP29016 333 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 ACVRL1P37023 503 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 LAPTM4AQ15012 233 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 OR8G1Q15617 311 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CDHR3Q6ZTQ4 885 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 GPRIN1Q7Z2K8 1008 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CCDC71LQ8N9Z2 235 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CALHM2Q9HA72 323 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 HES4Q9HCC6 221 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 MEPEQ9NQ76 525 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 STARD10Q9Y365 291 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CACNG2Q9Y698 323 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 MYO18AQ92614 2054 aaKnown RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 A0A0A6YYC8 382 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF732B4DXR9 585 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 I3L1I5 382 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 GNG7O60262 68 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CACNG3O60359 315 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 FTH1P19P0C7X4 201 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 ETFAP13804 333 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 EDNRBP24530 442 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 UQCRFS1P47985 274 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 ZNF766Q5HY98 468 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 NHSL2Q5HYW2 709 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 DNAJC22Q8N4W6 341 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 OR5H2Q8NGV7 314 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 RNF128Q8TEB7 428 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SHISA4Q96DD7 197 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 OR2D2Q9H210 308 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 AIG1Q9NVV5 245 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 CD8B2A6NJW9 211 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 A8MT66 165 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 FAM166BA8MTA8 275 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 C11orf98E9PRG8 122 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 J3QKU1 62 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM63AO94886 807 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 IL1R2P27930 398 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 FCER1GP30273 86 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 ASCL1P50553 236 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 RAP2BP61225 183 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 COL5A1-AS1Q5SY13 56 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 C1orf53Q5VUE5 145 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 HBMQ6B0K9 141 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 C12orf54Q6X4T0 127 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 LIPIQ6XZB0 460 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 TMEM184AQ6ZMB5 413 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 THSD4Q6ZMP0 1018 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 PRSS48Q7RTY5 328 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 BAGE3Q86Y29 109 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 BAGE2Q86Y30 109 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 PTRH1Q86Y79 214 aaKnown RBP7.98□□□□□ -1.13
SYNE1-206ENST00000367253 APCDD1Q8J025 514 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 GLIS3Q8NEA6 775 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 SCARB1Q8WTV0 552 aa7.98□□□□□ -1.13
SYNE1-206ENST00000367253 OR1E3Q8WZA6 343 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms