RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 FAM183AA6NL82 134 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMX2-CTNND1H3BSU7 103 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TCRBP04435 133 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CEACAM5P06731 702 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 IFI6P09912 130 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PTAFRP25105 342 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM240Q5SV17 173 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 C19orf47Q8N9M1 422 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 NAXEQ8NCW5 288 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 FNDC9Q8TBE3 224 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SYT3Q9BQG1 590 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CLDND1Q9NY35 253 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SERINC4A6NH21 518 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF726A6NNF4 738 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 GLCEO94923 617 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 CRYBB2P43320 205 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 PER3P56645 1201 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 DUSP5Q16690 384 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ACTBL2Q562R1 376 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ETFBKMTQ8IXQ9 262 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 ADIPOR1Q96A54 375 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC25A31Q9H0C2 315 aa4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 SIRT3Q9NTG7 399 aaPredicted RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 AK6Q9Y3D8 172 aaKnown RBP4.94□□□□□ -1.62
CDC42BPA-204ENST00000366767 TRAV1-2A0A0B4J238 106 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF736B4DX44 427 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM227AF5H4B4 570 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRAMEF4O60810 478 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 LDB3O75112 727 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 KNG1P01042 644 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 H2BFMP0C1H6 154 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 APEX1P27695 318 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SHC1P29353 583 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CRMP1Q14194 572 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 RBM39Q14498 530 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 PRAMEF9Q5VWM5 478 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 KIAA0895LQ68EN5 471 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZC3H14Q6PJT7 736 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CHAC2Q8WUX2 184 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZMYND19Q96E35 227 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 NMNAT2Q9BZQ4 307 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 BCO1Q9HAY6 547 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SLC6A20Q9NP91 592 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 PLSCR3Q9NRY6 295 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ATXN7L1Q9ULK2 861 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 BRCA1P38398 1863 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 LRP5LA4QPB2 252 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SCAF4O95104 1147 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 NQO2P16083 231 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 PTNP21246 168 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 DAP3P51398 398 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 YBX1P67809 324 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 PLCXD2Q0VAA5 305 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 AGBL4Q5VU57 503 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM244Q5VVB8 128 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 NIPAL3Q6P499 406 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 GLB1L2Q8IW92 636 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 UEVLDQ8IX04 471 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 TP53I13Q8NBR0 393 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CA5BP1Q8WTZ4 195 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 A0A1B0GWA3 101 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 A6NIN4 97 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 P2RX6O15547 441 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 GATCO43716 136 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 DUX1O43812 170 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 TPOP07202 933 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CA3P07451 260 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 MGST1P10620 155 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 LIPCP11150 499 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ERGP11308 486 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 HOXB9P17482 250 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 RAG2P55895 527 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 EBPQ15125 230 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 RBMS2Q15434 407 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 FAM209AQ5JX71 171 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR5M8Q8NGP6 311 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CNRIP1Q96F85 164 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 LMF1Q96S06 567 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SEMA4CQ9C0C4 833 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMPRSS5Q9H3S3 457 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 MOB1AQ9H8S9 216 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 TMEM212A6NML5 194 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 B4DXG7 233 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SOD1P00441 154 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 HLA-AP01891 365 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 GLAP06280 429 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 HBQ1P09105 142 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CSNK2A1P68400 391 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 BAMBIQ13145 260 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 IL10RAQ13651 578 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 LTB4RQ15722 352 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SSX1Q16384 188 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ZNF695Q8IW36 515 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 CSNK2A3Q8NEV1 391 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 OR6S1Q8NH40 331 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 BSCL2Q96G97 398 aaPredicted RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 SFXN2Q96NB2 322 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 USP36Q9P275 1121 aaKnown RBP4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 NCDNQ9UBB6 729 aa4.93□□□□□ -1.62
CDC42BPA-204ENST00000366767 ESPL1Q14674 2120 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms