RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 IGHV3-9P01782 118 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 HMGN1P05114 100 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ALPLP05186 524 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ITGA5P08648 1049 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 IL32P24001 234 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 CRISP1P54107 249 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 RAD23AP54725 363 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 MYBPC1Q00872 1141 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ROR2Q01974 943 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 RUNX1T1Q06455 604 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 RIPK1Q13546 671 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 DAG1Q14118 895 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 MESTQ5EB52 335 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 CLEC12AQ5QGZ9 265 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 CARD17Q5XLA6 110 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 LRFN4Q6PJG9 635 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ZBTB49Q6ZSB9 765 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 BHLHA15Q7RTS1 189 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 JAZF1Q86VZ6 243 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 HSD17B8Q92506 261 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 NMD3Q96D46 503 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 Q96M85 177 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ALKBH3Q96Q83 286 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 CIB1Q99828 191 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 PRRG3Q9BZD7 231 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 MOV10Q9HCE1 1003 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 OBP2BQ9NPH6 170 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 NPDC1Q9NQX5 325 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 TMEFF2Q9UIK5 374 aaPredicted RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 KLHL21Q9UJP4 597 aa12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 ANKHD1Q8IWZ3 2542 aaKnown RBP12.17□□□□□ -0.46
NSMCE1-201ENST00000361439 FREM1Q5H8C1 2179 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 TEX13CA0A0J9YWL9 993 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 SLC22A23A1A5C7 686 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 TUBAL3A6NHL2 446 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 ARHGEF9O43307 516 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 DHHO43323 396 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 SOX14O95416 240 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 IFNGP01579 166 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 QDPRP09417 244 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 CRABP1P29762 137 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 GRK5P34947 590 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 ZNF84P51523 738 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 CDK5Q00535 292 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 CD47Q08722 323 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 GABRA6Q16445 453 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 CEACAM16Q2WEN9 425 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 PGGHGQ32M88 737 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 TIMM23BQ5SRD1 257 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 ANKRD16Q6P6B7 361 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 WDFY1Q8IWB7 410 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 DMRTC2Q8IXT2 367 aaPredicted RBP12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 CBR4Q8N4T8 237 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 PACRGLQ8N7B6 248 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 SYT14Q8NB59 555 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 OR8D4Q8NGM9 314 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 MCHR2Q969V1 340 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 RDH12Q96NR8 316 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 DACH2Q96NX9 599 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 GABARAPL3Q9BY60 117 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 SLC25A19Q9HC21 320 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 ADGRG4Q8IZF6 3080 aa12.16□□□□□ -0.46
NSMCE1-201ENST00000361439 CIB4A0PJX0 185 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 OR5H1A6NKK0 313 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 EI24O14681 340 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 CASQ2O14958 399 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 LYZL6O75951 148 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 GOSR1O95249 250 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 RENP00797 406 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 HIST1H1CP16403 213 aaKnown RBP12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 POU1F1P28069 291 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 HOXC12P31275 282 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 GUCA1AP43080 201 aaPredicted RBP12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 NPRL3Q12980 569 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 GINS1Q14691 196 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 PHYHD1Q5SRE7 291 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 DNM1P34Q6PK57 102 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 SLC25A47Q6Q0C1 308 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 LINGO2Q7L985 606 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 DPPA2Q7Z7J5 298 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 OR1K1Q8NGR3 316 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 RASD2Q96D21 266 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 FOXB1Q99853 325 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 ACTR6Q9GZN1 396 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 RNPEPL1Q9HAU8 725 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 CMC2Q9NRP2 79 aa12.15□□□□□ -0.46
NSMCE1-201ENST00000361439 ARPC4-TTLL3A0A0A6YYG9 625 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 RIIAD1A6NNX1 92 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 SOCS2O14508 198 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 IGFBP1P08833 259 aaPredicted RBP12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 ZNF3P17036 446 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 NPR2P20594 1047 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 GRNP28799 593 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 CCKARP32238 428 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 CDKN2AP42771 156 aaKnown RBP12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 KIR2DL3P43628 341 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 CENPAP49450 140 aa12.14□□□□□ -0.47
NSMCE1-201ENST00000361439 SLC34A1Q06495 639 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms