RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 IER3IP1Q9Y5U9 82 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 SLCO1B1Q9Y6L6 691 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 TMEM131Q92545 1883 aa6.62□□□□□ -1.35
CLCN3-202ENST00000360642 BRWD1Q9NSI6 2320 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SERINC4A6NH21 518 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ARPC3O15145 178 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ORC5O43913 435 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 FZD7O75084 574 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 NSA2O95478 260 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ARSBP15848 533 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 RAB3BP20337 219 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 TALDO1P37837 337 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 GABRA4P48169 554 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 DIO1P49895 249 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 BTG1P62324 171 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ACTA2P62736 377 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ACTG2P63267 376 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SIRPAP78324 504 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SLC36A2Q495M3 483 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 TP53I3Q53FA7 332 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 PYHIN1Q6K0P9 492 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ARMC6Q6NXE6 501 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 RPS4Y2Q8TD47 263 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 HAVCR2Q8TDQ0 301 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CNN2Q99439 309 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 TMEM246Q9BRR3 403 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 PHF7Q9BWX1 381 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SLA2Q9H6Q3 261 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 Q9N2J8 555 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 MKKSQ9NPJ1 570 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 NRIP3Q9NQ35 241 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ADAM18Q9Y3Q7 739 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 A6NL46 340 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 LRRN3E7EW58 273 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 MAGEB4O15481 346 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 WIPF1O43516 503 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CDC123O75794 336 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SERPINA3P01011 423 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 IGF2P01344 180 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 UCHL1P09936 223 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CTSEP14091 401 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 EDN2P20800 178 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 RRAS2P62070 204 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 HSD11B2P80365 405 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 MAT1AQ00266 395 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 TNK1Q13470 666 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 EFR3AQ14156 821 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 NDUFAF6Q330K2 333 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 KLHL26Q53HC5 615 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ATPAF1Q5TC12 328 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 HACD4Q5VWC8 232 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF57Q68EA5 555 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 UNQ9370/PRO34162Q6UXP9 181 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SLC35F2Q8IXU6 374 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 FAM98AQ8NCA5 519 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 FAM71CQ8NEG0 241 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 OR5H6Q8NGV6 325 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 LILRB4Q8NHJ6 448 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 DGAT2Q96PD7 388 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 TRIB1Q96RU8 372 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 GPX7Q96SL4 187 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 LRRC61Q9BV99 259 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SLC19A3Q9BZV2 496 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 LRRN3Q9H3W5 708 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 PRTFDC1Q9NRG1 225 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 MRPS33Q9Y291 106 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF337Q9Y3M9 751 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 IGKV1D-42A0A075B6H8 117 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 A0A1W2PRG6 482 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 A0A1W2PRX2 142 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 OR6C68A6NDL8 312 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 OR2W5A6NFC9 320 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ANKRD61A6NGH8 418 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 OR6C70A6NIJ9 312 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CENPBD1B2RD01 187 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 INMT-MINDY4F8WBC2 141 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ZNF749O43361 778 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 PRKNO60260 465 aaPredicted RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 GATBO75879 557 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 OR7A10O76100 309 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ZFPL1O95159 310 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CSTAP01040 98 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ATF1P18846 271 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ERP29P30040 261 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 INPP1P49441 399 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 GSK3AP49840 483 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 GDI2P50395 445 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SKP1P63208 163 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ADAM8P78325 824 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 CCDC58Q4VC31 144 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SLC35D3Q5M8T2 416 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 FNDC7Q5VTL7 733 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 RPL22L1Q6P5R6 122 aaKnown RBP6.61□□□□□ -1.35
CLCN3-202ENST00000360642 ADGRE4PQ86SQ3 457 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 BMPERQ8N8U9 685 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 SMRP1Q8NCR6 262 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 OR51L1Q8NGJ5 315 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 LIPHQ8WWY8 451 aa6.61□□□□□ -1.35
CLCN3-202ENST00000360642 NMNAT3Q96T66 252 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms