RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FAM122BQ7Z309 247 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 THNSL2Q86YJ6 484 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 ASB11Q8WXH4 323 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 UBE2FQ969M7 185 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 KLF16Q9BXK1 252 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-203ENST00000359759 SCML1Q9UN30 329 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 CD46P15529 392 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 CD300LGQ6UXG3 332 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 RHOUQ7L0Q8 258 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 DCXRQ7Z4W1 244 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 ARFGAP1Q8N6T3 406 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 ATOH8Q96SQ7 321 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 SHARPINQ9H0F6 387 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 NEURL4Q96JN8 1562 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 IGHV3-64DA0A0J9YX35 117 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 SERINC4A6NH21 518 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 ABHD16AO95870 558 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 OLFM2O95897 454 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 UBE2G1P62253 170 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 ZMAT1Q5H9K5 638 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 LPCAT3Q6P1A2 487 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 SPRED1Q7Z699 444 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 NMES1Q9C002 83 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 SPACA1Q9HBV2 294 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 ISYNA1Q9NPH2 558 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 MOKQ9UQ07 419 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 OR6C68A6NDL8 312 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 TRABD2BA6NFA1 517 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 IGHV3-9P01782 118 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 GLI4P10075 376 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 KHDC1LQ5JSQ8 128 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 LYSMD4Q5XG99 296 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 PGAP3Q96FM1 320 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-203ENST00000359759 OR6C1Q96RD1 312 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 DHRS4Q9BTZ2 278 aa14.8□□□□□ -0.04
COL18A1-203ENST00000359759 GPR55Q9Y2T6 319 aaPredicted RBP14.8□□□□□ -0.04
COL18A1-203ENST00000359759 TACR1P25103 407 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 HTR1FP30939 366 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 UBE2IP63279 158 aaKnown RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 NXNL2Q5VZ03 156 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 GDF7Q7Z4P5 450 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 RNF113BQ8IZP6 322 aaKnown RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 CITO14578 2027 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 K7EQM0 130 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 SCRG1O75711 98 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 CR2P20023 1033 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 GABREP78334 506 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 H2BFWTQ7Z2G1 175 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 MARCH3Q86UD3 253 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 PPP1R3BQ86XI6 285 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 LILRA2Q8N149 483 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 ATOH1Q92858 354 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 KCTD12Q96CX2 325 aaKnown RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 C3P01024 1663 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 SETD1AO15047 1707 aaKnown RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR5H15A6NDH6 313 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR5H14A6NHG9 310 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR5H1A6NKK0 313 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 GPRIN2O60269 458 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 PMS2P2O95744 297 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 HLA-FP30511 346 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 VEGFBP49765 207 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 AGFG1P52594 562 aaKnown RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR2B8PP59922 312 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 SLC46A3Q7Z3Q1 461 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 ADGRE4PQ86SQ3 457 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR5B3Q8NH48 314 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR5K2Q8NHB8 316 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 PTDSS2Q9BVG9 487 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 GALR3O60755 368 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-203ENST00000359759 MT-ND4LP03901 98 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 PIGAP37287 484 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 RAB38P57729 211 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 PKDCCQ504Y2 493 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 MED25Q71SY5 747 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 SRPK3Q9UPE1 567 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 KIR2DS5A0A0G2JLQ3 304 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 A0A0G2JNG1 304 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 ZNF732B4DXR9 585 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 KIR2DS3K7RE56 304 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 CTSAP10619 480 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 KIR2DS5Q14953 304 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 UBAC2Q8NBM4 344 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR4F5Q8NH21 305 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 OR4F4Q96R69 305 aa14.79□□□□□ -0.04
COL18A1-203ENST00000359759 A0A087WV62 115 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 H3BQ06 376 aaPredicted RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 SLC14A2Q15849 920 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 LINC00696Q6ZRV3 163 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 ANGPTL5Q86XS5 388 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 DDOQ99489 341 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 RYDENQ9NUL5 291 aaKnown RBP14.78□□□□□ -0.04
COL18A1-203ENST00000359759 FBXL4Q9UKA2 621 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 UMAD1C9J7I0 102 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 M0QZQ0 153 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 DEGS1O15121 323 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 B3GALNT1O75752 331 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 DRD1P21728 446 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 TRIM23P36406 574 aa14.78□□□□□ -0.04
COL18A1-203ENST00000359759 TAGLNQ01995 201 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms