RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MISPQ8IVT2 679 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM71CQ8NEG0 241 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZPLD1Q8TCW7 415 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 DVL3Q92997 716 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2A7Q96R45 310 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 MFFQ9GZY8 342 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 PRSS16Q9NQE7 514 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 C2orf42Q9NWW7 574 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 CDV3Q9UKY7 258 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 V9GY05 133 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 KIF26AQ9ULI4 1882 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 TRAV1-2A0A0B4J238 106 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2M5A3KFT3 312 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 GABARAPH6UMI1 98 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 PIN1P1O15428 100 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 B3GALT2O43825 422 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 FGF17O60258 216 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 AGR2O95994 175 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 PVRP15151 417 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ABCD3P28288 659 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 NPBWR1P48145 328 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 PTH2RP49190 550 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 VASPP50552 380 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 STARD6P59095 220 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 BPIFB3P59826 476 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RPS11P62280 158 aaKnown RBP eCLIP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ACTA2P62736 377 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ACTG2P63267 376 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM52BQ4KMG9 183 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RPL13AP3Q6NVV1 102 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ARHGAP11AQ6P4F7 1023 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 FAM199XQ6PEV8 388 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC39A5Q6ZMH5 540 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RNF113BQ8IZP6 322 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 GATSQ8NAP1 163 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR4N2Q8NGD1 307 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 HAVCR2Q8TDQ0 301 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC25A38Q96DW6 304 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 NEU1Q99519 415 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 JAM3Q9BX67 310 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 SRMSQ9H3Y6 488 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 BARX1Q9HBU1 254 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 SRA1Q9HD15 236 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 DZANK1Q9NVP4 752 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 NCDNQ9UBB6 729 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 KIAA0100Q14667 2235 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OBSL1O75147 1896 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 LRRK1Q38SD2 2015 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 CCDC85CA6NKD9 419 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 P2RX6O15547 441 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR10H2O60403 315 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 SLC34A2O95436 690 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 EML2O95834 649 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 F12P00748 615 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ANXA2P07355 339 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2T7P0C7T2 308 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 UBBP0CG47 229 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 UBCP0CG48 685 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 CPN1P15169 458 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF44P15621 663 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF14P17017 642 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ADCYAP1P18509 176 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ITPKBP27987 946 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 DRD3P35462 400 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RBP2P50120 134 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 P2RX1P51575 399 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 NANOS3P60323 173 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RPS27AP62979 156 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 UBA52P62987 128 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 CBFBQ13951 182 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ATXN7L3Q14CW9 347 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 RPL22L1Q6P5R6 122 aaKnown RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 GLDNQ6ZMI3 551 aaPredicted RBP7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMPRSS11FQ6ZWK6 438 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMED4Q7Z7H5 227 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2L13Q8N349 312 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF561Q8N587 486 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 OR2T27Q8NH04 317 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 VWCEQ96DN2 955 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ULBP3Q9BZM4 244 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 ZNF350Q9GZX5 532 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 LMAN2LQ9H0V9 348 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 TLNRD1Q9H1K6 362 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 FLRT3Q9NZU0 649 aa7.52□□□□□ -1.21
CDC42SE1-201ENST00000357235 COL4A6Q14031 1691 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 ARID1AO14497 2285 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 LOC100509620A0A075B734 347 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 TMEM72A0PK05 275 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 C9orf170A2RU37 121 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 H7C1C5 153 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CLDN4O14493 209 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CSN2P05814 226 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 HOXC4P09017 264 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 CD53P19397 219 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 PPM1FP49593 454 aaPredicted RBP7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 EMDP50402 254 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 ART1P52961 327 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 SEC13P55735 322 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 LCN6P62502 163 aa7.51□□□□□ -1.21
CDC42SE1-201ENST00000357235 MAT1AQ00266 395 aaKnown RBP7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms