RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 SAMHD1Q9Y3Z3 626 aaKnown RBP3.49□□□□□ -1.85
CNOT4-202ENST00000356162 MAGED1Q9Y5V3 778 aaPredicted RBP3.49□□□□□ -1.85
CNOT4-202ENST00000356162 GCN1Q92616 2671 aaKnown RBP3.49□□□□□ -1.85
CNOT4-202ENST00000356162 RAI1Q7Z5J4 1906 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TRAV27A0A087WT01 109 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR5H1A6NKK0 313 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 DEFB108AA8MXU0 73 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 BLOC1S5-TXNDC5H3BN57 136 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CDC42EP2O14613 210 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 IMPA2O14732 288 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CASKO14936 926 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR10H3O60404 316 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RAD51DO75771 328 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SERPINI2O75830 405 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 IGHV3-9P01782 118 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 HRGP04196 525 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CD14P08571 375 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 PGA4P0DJD7 388 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 PGA3P0DJD8 388 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FCGR1AP12314 374 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 APEHP13798 732 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 LOXP28300 417 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF133P52736 654 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CLRN1P58418 232 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CTXN1P60606 82 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RPL27P61353 136 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ID3Q02535 119 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 GABPB1Q06547 395 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TSPAN31Q12999 210 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CAMK2DQ13557 499 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FHL1Q13642 323 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 PPA1Q15181 289 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 GABRA6Q16445 453 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ACKR1Q16570 336 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 C3orf36Q3SXR2 165 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 C10orf128Q5T292 105 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ARMC4Q5T2S8 1044 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 C1orf146Q5VVC0 180 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CARD17Q5XLA6 110 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 GPR139Q6DWJ6 353 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RPL13AP3Q6NVV1 102 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 C1orf94Q6P1W5 598 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ANKRD16Q6P6B7 361 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF620Q6ZNG0 422 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF627Q7L945 461 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 LINGO2Q7L985 606 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 YTHDF3Q7Z739 585 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TMEM200AQ86VY9 491 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR6N1Q8NGY5 312 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 OR52J3Q8NH60 311 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF519Q8TB69 540 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FNDC8Q8TC99 324 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CANT1Q8WVQ1 401 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 DNAJC9Q8WXX5 260 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF566Q969W8 418 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 MUS81Q96NY9 551 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FANCD2OSQ96PS1 177 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RAB3IPQ96QF0 476 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CHID1Q9BWS9 393 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 DGCR6LQ9BY27 220 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RASSF1Q9NS23 344 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CCM2LQ9NUG4 571 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 VNN3Q9NY84 501 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 GLTPQ9NZD2 209 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 MGAT4BQ9UQ53 548 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SIGLEC7Q9Y286 467 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 POFUT2Q9Y2G5 429 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SLC25A15Q9Y619 301 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CDH10Q9Y6N8 788 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 PTPN13Q12923 2485 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FREM1Q5H8C1 2179 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF99A8MXY4 864 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 AHCYL1O43865 530 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 PTP4A3O75365 173 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CTAG2O75638 210 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TRMUO75648 421 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TXNDC12O95881 172 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CST1P01037 141 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ACADSP16219 412 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 GSTM3P21266 225 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SLC6A6P31641 620 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RPL4P36578 427 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF84P51523 738 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 RPS6KA3P51812 740 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FOXG1P55316 489 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 LGALS3BPQ08380 585 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 FOXD4Q12950 439 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TOP3AQ13472 1001 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 KRR1Q13601 381 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SNTB1Q13884 538 aaKnown RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CCNIQ14094 377 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TSC22D1Q15714 1073 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TAB1Q15750 504 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 MICAQ29983 383 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 CEACAM16Q2WEN9 425 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 TBRG1Q3YBR2 411 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 NRN1LQ496H8 165 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 PHYHD1Q5SRE7 291 aa3.48□□□□□ -1.85
CNOT4-202ENST00000356162 ZNF770Q6IQ21 691 aaPredicted RBP3.48□□□□□ -1.85
CNOT4-202ENST00000356162 SMARCD3Q6STE5 483 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms