RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 ALX4Q9H161 411 aaPredicted RBP17.18■□□□□ 0.34
PRPF39-201ENST00000355765 HCFC1R1Q9NWW0 138 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 SHPKQ9UHJ6 478 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 MRM2Q9UI43 246 aaKnown RBP17.18■□□□□ 0.34
PRPF39-201ENST00000355765 A0A0B4J2E0 115 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 CXorf51AA0A1B0GTR3 108 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 A0A1B0GX12 115 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 A0A1W2PPE3 182 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 COLCA2A8K830 154 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 FGF16O43320 207 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 HOXA2O43364 376 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 VEGFDO43915 354 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 INHAP05111 366 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 DCNP07585 359 aaKnown RBP17.18■□□□□ 0.34
PRPF39-201ENST00000355765 CSRP1P21291 193 aaKnown RBP17.18■□□□□ 0.34
PRPF39-201ENST00000355765 HSD17B2P37059 387 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 CCR2P41597 374 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 OTPQ5XKR4 325 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 FAM220AQ7Z4H9 259 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 ZNF676Q8N7Q3 588 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 RPS4Y2Q8TD47 263 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 EDARADDQ8WWZ3 215 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 INSM2Q96T92 566 aaPredicted RBP17.18■□□□□ 0.34
PRPF39-201ENST00000355765 HRH4Q9H3N8 390 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 GHRLQ9UBU3 117 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 WNT6Q9Y6F9 365 aa17.18■□□□□ 0.34
PRPF39-201ENST00000355765 ITGA5P08648 1049 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 ECH1Q13011 328 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 METRNLQ641Q3 311 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 TMEM205Q6UW68 189 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 CRIPAKQ8N1N5 446 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 CASTOR1Q8WTX7 329 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 ADAD1Q96M93 576 aaKnown RBP17.17■□□□□ 0.34
PRPF39-201ENST00000355765 MICU1Q9BPX6 476 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 POTEKPQ9BYX7 375 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 SPHK2Q9NRA0 654 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 RPH3AQ9Y2J0 694 aaPredicted RBP17.17■□□□□ 0.34
PRPF39-201ENST00000355765 AGR2O95994 175 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 PTAFRP25105 342 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 CST5P28325 142 aaPredicted RBP17.17■□□□□ 0.34
PRPF39-201ENST00000355765 CEBPEQ15744 281 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 C2orf76Q3KRA6 126 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 KCTD9Q7L273 389 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 ZCCHC10Q8TBK6 192 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 ELP5Q8TE02 316 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
PRPF39-201ENST00000355765 C14orf79Q96F83 325 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 RXFP3Q9NSD7 469 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 TMEM74BQ9NUR3 256 aa17.17■□□□□ 0.34
PRPF39-201ENST00000355765 THSD7BQ9C0I4 1608 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 TVP23AA6NH52 213 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 YKT6O15498 198 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 RNGTTO60942 597 aaKnown RBP17.16■□□□□ 0.34
PRPF39-201ENST00000355765 UPK3AO75631 287 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 RPS4Y1P22090 263 aaKnown RBP17.16■□□□□ 0.34
PRPF39-201ENST00000355765 EXOSC7Q15024 291 aaKnown RBP17.16■□□□□ 0.34
PRPF39-201ENST00000355765 IRF4Q15306 451 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 TGIF1Q15583 401 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 EIF2S3LQ2VIR3 472 aaKnown RBP17.16■□□□□ 0.34
PRPF39-201ENST00000355765 VWA2Q5GFL6 755 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 NKAPLQ5M9Q1 402 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 USP53Q70EK8 1073 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 SLC29A4Q7RTT9 530 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 C3orf49Q96BT1 292 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 SPSB2Q99619 263 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 ALG12Q9BV10 488 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 SEC11CQ9BY50 192 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 ACKR4Q9NPB9 350 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 OR52A4PA6NMU1 304 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 EMDP50402 254 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 LEG1Q6P5S2 330 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRPF39-201ENST00000355765 CD163Q86VB7 1156 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 CACUL1Q86Y37 369 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 MISPQ8IVT2 679 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 NUBPLQ8TB37 319 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 GPX8Q8TED1 209 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 ENTPD2Q9Y5L3 495 aa17.16■□□□□ 0.34
PRPF39-201ENST00000355765 S100A8P05109 93 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 ZNF888P0CJ79 500 aaPredicted RBP17.15■□□□□ 0.34
PRPF39-201ENST00000355765 ST6GAL1P15907 406 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 SDHAP31040 664 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 GPR143P51810 404 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 TAS2R19P59542 299 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 ZNF684Q5T5D7 378 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 TMEFF1Q8IYR6 380 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 BPIFB2Q8N4F0 458 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 OR4S1Q8NGB4 309 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 PIK3IP1Q96FE7 263 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 C5orf52A6NGY3 159 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 LRRC72A6NJI9 287 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 ZNF208O43345 1280 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 LRG1P02750 347 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 MUC1P15941 1255 aaPredicted RBP17.15■□□□□ 0.34
PRPF39-201ENST00000355765 VEGFBP49765 207 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 AIMP2Q13155 320 aaKnown RBP17.15■□□□□ 0.34
PRPF39-201ENST00000355765 SLC39A5Q6ZMH5 540 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 STOML3Q8TAV4 291 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 FAM3DQ96BQ1 224 aa17.15■□□□□ 0.34
PRPF39-201ENST00000355765 SEH1LQ96EE3 360 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms