RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 UBTD2Q8WUN7 234 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 LRFN5Q96NI6 719 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 CTSFQ9UBX1 484 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 OR10H1Q9Y4A9 318 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 IER3IP1Q9Y5U9 82 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 U3KQ87 197 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 MGAT4DA6NG13 374 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 H0YGG7 62 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 SLC22A2O15244 555 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 NOS1APO75052 506 aaPredicted RBP4.98□□□□□ -1.61
CD47-201ENST00000355354 SMIM10L1P0DMW3 83 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 RRADP55042 308 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ARF3P61204 181 aaPredicted RBP4.98□□□□□ -1.61
CD47-201ENST00000355354 NKPD1Q17RQ9 610 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 PRAMEF13Q5VWM6 474 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 RUSC1-AS1Q66K80 236 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 TIGD3Q6B0B8 471 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 NIPAL3Q6P499 406 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 NLRC3Q7RTR2 1065 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 SVOPQ8N4V2 548 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 OR52E2Q8NGJ4 325 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 OR5K2Q8NHB8 316 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 LHFPL5Q8TAF8 219 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 RNFT2Q96EX2 444 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 SMIM10Q96HG1 83 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 STACQ99469 402 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 TAS2R5Q9NYW4 299 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 CHRNA9Q9UGM1 479 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 KLHL21Q9UJP4 597 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ANGPTL3Q9Y5C1 460 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 KLK4Q9Y5K2 254 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 PFDN6O15212 129 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 GSTA4O15217 222 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 BCAT2O15382 392 aaPredicted RBP4.98□□□□□ -1.61
CD47-201ENST00000355354 SLC25A12O75746 678 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ALX3O95076 343 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 MAS1P04201 325 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 WDR45BQ5MNZ6 344 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 DRAM2Q6UX65 266 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 OR8S1Q8NH09 359 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 CALML6Q8TD86 181 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ADOQ96SZ5 270 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 TMEM38AQ9H6F2 299 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ERVK-19Q9WJR5 959 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 IGHV3-15A0A0B4J1V0 119 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 LINC00587B1AMM8 73 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 C11orf98E9PRG8 122 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 NPIPB9F8W1W9 429 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ZNF254O75437 659 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 NME1P15531 152 aaKnown RBP4.98□□□□□ -1.61
CD47-201ENST00000355354 CPEP16870 476 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 DUSP1P28562 367 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 GABRA5P31644 462 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 PMPCAQ10713 525 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 CSNK1A1LQ8N752 337 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 OR10H4Q8NGA5 316 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ABHD4Q8TB40 342 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 NPRL2Q8WTW4 380 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 PPCDCQ96CD2 204 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 PLPPR2Q96GM1 343 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 FAM117AQ9C073 453 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 ZDHHC8Q9ULC8 765 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 KCNE2Q9Y6J6 123 aa4.98□□□□□ -1.61
CD47-201ENST00000355354 TEX13CA0A0J9YWL9 993 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 DNASE2O00115 360 aaPredicted RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 FAAHO00519 579 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 EIF4E2O60573 245 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 SCELO95171 688 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 IGHA1P01876 353 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 CD55P08174 381 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 RNF224P0DH78 156 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 RPS2P15880 293 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 SP6Q3SY56 376 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 SFXN4Q6P4A7 337 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 FGD2Q7Z6J4 655 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 FGFRL1Q8N441 504 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 THEM6Q8WUY1 208 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 OR5P3Q8WZ94 311 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ADAT3Q96EY9 351 aaPredicted RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 SLC46A1Q96NT5 459 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 MCHR1Q99705 422 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 EIF3KQ9UBQ5 218 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 STEAP1Q9UHE8 339 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 DAPP1Q9UN19 280 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 SPTY2D1-AS1A0A0U1RR47 76 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 LYRM1O43325 122 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 TNFSF12O43508 249 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 PPM1BO75688 479 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ZNF735P0CB33 412 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ABOP16442 354 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ZNF12P17014 697 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 LMO1P25800 156 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 HLA-DMAP28067 261 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 RPS16P62249 146 aaKnown RBP4.97□□□□□ -1.61
CD47-201ENST00000355354 CBFBQ13951 182 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 PRICKLE4Q2TBC4 344 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ACSM3Q53FZ2 586 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 ZBTB37Q5TC79 503 aa4.97□□□□□ -1.61
CD47-201ENST00000355354 DMKNQ6E0U4 476 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms