RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 PLPP6Q8IY26 295 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 LINC00116Q8NCU8 138 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ZC3HAV1LQ96H79 300 aaKnown RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 VNN1O95497 513 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ITGB7P26010 798 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ARNTP27540 789 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 DHODHQ02127 395 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 RAB40CQ96S21 281 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ARHGAP9Q9BRR9 750 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 INIPQ9NRY2 104 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 GPR31O00270 319 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CD14P08571 375 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ISCA2Q86U28 154 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CPOQ8IVL8 374 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CCDC187A0A096LP49 1063 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OPN1SWP03999 348 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 PCCBP05166 539 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 NAA10P41227 235 aaPredicted RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 SNRPD2P62316 118 aaKnown RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 RNF111Q6ZNA4 994 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OR4B1Q8NGF8 309 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 SERTAD4Q9NUC0 356 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 GABRB1P18505 474 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 GLDNQ6ZMI3 551 aaPredicted RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 TRILQ7L0X0 811 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ZNF595Q8IYB9 648 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 L3MBTL4Q8NA19 623 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 LGALS14Q8TCE9 139 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 PP6455Q8WZ26 134 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 MRGPRX2Q96LB1 330 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 NSUN5Q96P11 429 aaKnown RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 ANKRD30BLA7E2S9 258 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 DNPH1O43598 174 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CDC123O75794 336 aaPredicted RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 ATXN8OSP0DMR3 200 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OR4D2P58180 307 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 COL5A1-AS1Q5SY13 56 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OR2T2Q6IF00 324 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 LBX2Q6XYB7 198 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 LSMEM1Q8N8F7 131 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 UBXN10Q96LJ8 280 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 METTL9Q9H1A3 318 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ZNF223Q9UK11 482 aaPredicted RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 POLDIP2Q9Y2S7 368 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CLDN5O00501 218 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CHEK1O14757 476 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 FBLP22087 321 aaKnown RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 SPCS3P61009 180 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 IL10RAQ13651 578 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OR8U1Q8NH10 309 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 TMPRSS13Q9BYE2 586 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CNOT1A5YKK6 2376 aaKnown RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 TXNDC12O95881 172 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 APEHP13798 732 aaKnown RBP7.44□□□□□ -1.22
HTT-201ENST00000355072 HSF1Q00613 529 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 SFRP5Q5T4F7 317 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 TFAP2EQ6VUC0 442 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 Q6ZTK2 550 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OR51S1Q8NGJ8 323 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 OR14A16Q8NHC5 309 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 EID2BQ96D98 161 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 ZNF160Q9HCG1 818 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.44□□□□□ -1.226e-6■■■■□ 22.2
HTT-201ENST00000355072 IGSF5Q9NSI5 407 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 LOC730098B7Z3J9 87 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 CREB3L4Q8TEY5 395 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 KCNA7Q96RP8 456 aa7.44□□□□□ -1.22
HTT-201ENST00000355072 DUXBA0A1W2PPF3 345 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ELAVL4P26378 380 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 AGFG1P52594 562 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 GAB1Q13480 694 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 TOMM34Q15785 309 aaPredicted RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 SYT14P1Q58G82 188 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 B3GNT9Q6UX72 402 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 TMEM64Q6YI46 380 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 EXD3Q8N9H8 876 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 EDARADDQ8WWZ3 215 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PACRGQ96M98 296 aaPredicted RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 DUSP23Q9BVJ7 150 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 LCATP04180 440 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ST6GAL1P15907 406 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 HNRNPA2B1P22626 353 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 MS4A2Q01362 244 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SLC14A1Q13336 389 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 TRIM61Q5EBN2 209 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PQLC3Q8N755 202 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 KCNK6Q9Y257 313 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 A0A0G2JLW4 131 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 BUD23O43709 281 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 ARAFP10398 606 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PIGPP57054 158 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 FPGSQ05932 587 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 TARBP2Q15633 366 aaKnown RBP7.43□□□□□ -1.22
HTT-201ENST00000355072 ZNF765Q7L2R6 523 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 PRR22Q8IZ63 422 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ZDHHC22Q8N966 263 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 ZNF738Q8NE65 137 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 OR5K2Q8NHB8 316 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 LMO3Q8TAP4 145 aa7.43□□□□□ -1.22
HTT-201ENST00000355072 SULT2B1O00204 365 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms