RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 CBLL1Q75N03 491 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 CLDN22Q8N7P3 220 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 COL26A1Q96A83 441 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 MARS2Q96GW9 593 aaKnown RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 LRR1Q96L50 414 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 TTTY10Q9BZA0 68 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 OR51I1Q9H343 314 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 TMEM185BQ9H7F4 350 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 EQTNQ9NQ60 294 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 EXOSC3Q9NQT5 275 aaKnown RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 FER1L5A0AVI2 2057 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF729A6NN14 1252 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF879B4DU55 563 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 GDF9O60383 454 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 PMP2P02689 132 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 GABRA1P14867 456 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 HOXB6P17509 224 aaKnown RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 MAOAP21397 527 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 KHKP50053 298 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 CDK6Q00534 326 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 C1orf189Q5VU69 101 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 MFSD12Q6NUT3 480 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 HSD17B13Q7Z5P4 300 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 KLHL36Q8N4N3 616 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 OR1S2Q8NGQ3 325 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 SLC38A5Q8WUX1 472 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 THAP4Q8WY91 577 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 LRFN5Q96NI6 719 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 GABARAPL3Q9BY60 117 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 ACTRT3Q9BYD9 372 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 RIMS4Q9H426 269 aaPredicted RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 TRPC4Q9UBN4 977 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 RASD1Q9Y272 281 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 LSM2Q9Y333 95 aaKnown RBP9.19□□□□□ -0.94
SYNE1-203ENST00000354674 WDR87Q6ZQQ6 2873 aa9.19□□□□□ -0.94
SYNE1-203ENST00000354674 SPTBP11277 2137 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 A0A1B0GVI7 797 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 PLSCR5A0PG75 271 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ARGFXA6NJG6 315 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CDC123O75794 336 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 RELQ04864 619 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 FUT5Q11128 374 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 STX4Q12846 297 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 DUSP8Q13202 625 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ARHGAP40Q5TG30 622 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 STPG1Q5TH74 334 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 RAB12Q6IQ22 244 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ADAM5Q6NVV9 412 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CDC73Q6P1J9 531 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 TNFAIP8L2Q6P589 184 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 FIGNL1Q6PIW4 674 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CLEC9AQ6UXN8 241 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CASP12Q6UXS9 341 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 TSEN54Q7Z6J9 526 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 PLPP5Q8NEB5 264 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 NFKBIDQ8NI38 313 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 C16orf58Q96GQ5 468 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 THOC3Q96J01 351 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 SOX7Q9BT81 388 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 C20orf24Q9BUV8 137 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 GGACTQ9BVM4 153 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ENKD1Q9H0I2 346 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 SLC26A1Q9H2B4 701 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 POFUT2Q9Y2G5 429 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 SYNDIG1LA6NDD5 238 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 VSTM2BA6NLU5 285 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 SNRPCP09234 159 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 OR12D1P0DN82 309 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CCL4P13236 92 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 NT5EP21589 574 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ADH7P40394 386 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 KCNJ10P78508 379 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 DCDP81605 110 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 SORDQ00796 357 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 FUT7Q11130 342 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 LASP1Q14847 261 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 NKAIN1Q4KMZ8 207 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 PRAMEF8Q5VWM4 474 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 PRAMEF7Q5VXH5 474 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 OR52W1Q6IF63 320 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 HEPHL1Q6MZM0 1159 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 REEP3Q6NUK4 255 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 KLBQ86Z14 1044 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ARRDC1Q8N5I2 433 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ELP5Q8TE02 316 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ACOT11Q8WXI4 607 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 HGDQ93099 445 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 LIN37Q96GY3 246 aaPredicted RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 C7orf34Q96L11 122 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 OR7D2Q96RA2 312 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 C20orf85Q9H1P6 137 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ASCC3Q8N3C0 2202 aaKnown RBP9.18□□□□□ -0.94
SYNE1-203ENST00000354674 OR10H3O60404 316 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 HPP00738 406 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 CLPSP04118 112 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ZNF44P15621 663 aa9.18□□□□□ -0.94
SYNE1-203ENST00000354674 ATP6V1E1P36543 226 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms