RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 TIMP4Q99727 224 aa18.33■□□□□ 0.52
TRIM4-202ENST00000354241 COPS3Q9UNS2 423 aa18.33■□□□□ 0.52
TRIM4-202ENST00000354241 SPTBN2O15020 2390 aa18.33■□□□□ 0.52
TRIM4-202ENST00000354241 AKAP13Q12802 2813 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 LOC100506127A0A0U1RQW1 187 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 SLC35F4A4IF30 521 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 DNPH1O43598 174 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 AKAP8O43823 692 aaKnown RBP18.32■□□□□ 0.52
TRIM4-202ENST00000354241 VAMP5O95183 116 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 AGFG1P52594 562 aaKnown RBP18.32■□□□□ 0.52
TRIM4-202ENST00000354241 CLRN1P58418 232 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 NCS1P62166 190 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 NFATC3Q12968 1075 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 DNM1P34Q6PK57 102 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 HDDC2Q7Z4H3 204 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 PHC2Q8IXK0 858 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 TIGD4Q8IY51 512 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 FAM109AQ8N4B1 249 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 OR6N2Q8NGY6 317 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 C4orf36Q96KX1 117 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 CHCHD6Q9BRQ6 235 aa18.32■□□□□ 0.52
TRIM4-202ENST00000354241 TNRC6AQ8NDV7 1962 aaKnown RBP18.32■□□□□ 0.52
TRIM4-202ENST00000354241 NPIPA2E9PIF3 369 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 NPIPA3F8WFD2 350 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 J3QLW9 94 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SMAD9O15198 467 aaKnown RBP18.31■□□□□ 0.52
TRIM4-202ENST00000354241 MT-ND5P03915 603 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 ZNF19P17023 458 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 CLDN17P56750 224 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 RPS3AP61247 264 aaKnown RBP18.31■□□□□ 0.52
TRIM4-202ENST00000354241 PDSS1Q5T2R2 415 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 CARD17Q5XLA6 110 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 VASNQ6EMK4 673 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 TRILQ7L0X0 811 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.31■□□□□ 0.52
TRIM4-202ENST00000354241 ALDH16A1Q8IZ83 802 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 INTS14Q96SY0 518 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 WDR76Q9H967 626 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 NDUFB11Q9NX14 153 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 QPCTLQ9NXS2 382 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 COA3Q9Y2R0 106 aaPredicted RBP18.31■□□□□ 0.52
TRIM4-202ENST00000354241 TRIM64BA6NI03 449 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 ZNF726A6NNF4 738 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 ZNF670-ZNF695F2Z2N8 137 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SLC22A1O15245 554 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 IGHG1P01857 330 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 ITGB2P05107 769 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 CLDN15P56746 228 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 OR12D2P58182 307 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 PMP22Q01453 160 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SRYQ05066 204 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SLC10A1Q14973 349 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 TP53I3Q53FA7 332 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 C19orf48Q6RUI8 117 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 NOXO1Q8NFA2 376 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 OR6X1Q8NH79 312 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SNX33Q8WV41 574 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SLC25A44Q96H78 314 aaPredicted RBP18.31■□□□□ 0.52
TRIM4-202ENST00000354241 SMAD5Q99717 465 aaKnown RBP18.31■□□□□ 0.52
TRIM4-202ENST00000354241 DEFB127Q9H1M4 99 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 BABAM2Q9NXR7 383 aa18.31■□□□□ 0.52
TRIM4-202ENST00000354241 TRAV17A0A0B4J275 112 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 MAGEB4O15481 346 aaPredicted RBP18.3■□□□□ 0.52
TRIM4-202ENST00000354241 AHCYL1O43865 530 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 TGFBR1P36897 503 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 LHX2P50458 406 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 BLVRAP53004 296 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 ACTA2P62736 377 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 ACTG2P63267 376 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 ACSM1Q08AH1 577 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 TIMM50Q3ZCQ8 353 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 OTPQ5XKR4 325 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 OR9K2Q8NGE7 335 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 NDNFQ8TB73 568 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 ROBO4Q8WZ75 1007 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 ADAD1Q96M93 576 aaKnown RBP18.3■□□□□ 0.52
TRIM4-202ENST00000354241 RBP7Q96R05 134 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 TIGARQ9NQ88 270 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 LIPGQ9Y5X9 500 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 DCHS1Q96JQ0 3298 aa18.3■□□□□ 0.52
TRIM4-202ENST00000354241 IGKV1D-43A0A0B4J1Z2 117 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 PGA4P0DJD7 388 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 PGA3P0DJD8 388 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 PSMA1P25786 263 aaKnown RBP18.29■□□□□ 0.52
TRIM4-202ENST00000354241 GLO1Q04760 184 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 TPBGQ13641 420 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 POU4F3Q15319 338 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 RNFT1Q5M7Z0 435 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 ASB18Q6ZVZ8 466 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 CREB3L2Q70SY1 520 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 CDC20BQ86Y33 519 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 NSMAFQ92636 917 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 MRPL48Q96GC5 212 aaKnown RBP18.29■□□□□ 0.52
TRIM4-202ENST00000354241 MFRPQ9BY79 579 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 MRPL13Q9BYD1 178 aaKnown RBP18.29■□□□□ 0.52
TRIM4-202ENST00000354241 LDAHQ9H6V9 325 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 EXO5Q9H790 373 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 MARCH7Q9H992 704 aa18.29■□□□□ 0.52
TRIM4-202ENST00000354241 EXOSC4Q9NPD3 245 aaKnown RBP18.29■□□□□ 0.52
TRIM4-202ENST00000354241 TRIM36Q9NQ86 728 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms