RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PCBP4P57723 403 aaKnown RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 LTBQ06643 244 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 GRK1Q15835 563 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 LIPNQ5VXI9 398 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 KCTD20Q7Z5Y7 419 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 OR5AS1Q8N127 324 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 IP6K3Q96PC2 410 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 OR2S2Q9NQN1 319 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 MGAT4CQ9UBM8 478 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 PFDN2Q9UHV9 154 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ZNF175Q9Y473 711 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 KIF13BQ9NQT8 1826 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 RAB3DO95716 219 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 GUSBP08236 651 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 SPI1P17947 270 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ACTBP60709 375 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ACTG1P63261 375 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 PMS2CLQ68D20 193 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 PYHIN1Q6K0P9 492 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 CBLN3Q6UW01 205 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 OR6V1Q8N148 313 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 PLA2G12AQ9BZM1 189 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 CRLF2Q9HC73 371 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 TXNL4BQ9NX01 149 aaKnown RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 PVALBP20472 110 aaPredicted RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 GABRA5P31644 462 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 RAB2AP61019 212 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 TEKQ02763 1124 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ZNF700Q9H0M5 742 aa12.48□□□□□ -0.41
SMC6-201ENST00000351948 ZNF71Q9NQZ8 489 aaPredicted RBP12.48□□□□□ -0.41
SMC6-201ENST00000351948 MYO16Q9Y6X6 1858 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 LYRM1O43325 122 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 VEGFCP49767 419 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 IDH3GP51553 393 aaPredicted RBP12.47□□□□□ -0.41
SMC6-201ENST00000351948 AKR1C2P52895 323 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 UBE2IP63279 158 aaKnown RBP12.47□□□□□ -0.41
SMC6-201ENST00000351948 ZNF321PQ8N8H1 164 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 OR11G2Q8NGC1 345 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 DVL2O14641 736 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 ZNF81P51508 661 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 ATP1B3P54709 279 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 ZNF117Q03924 483 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 TRA2AQ13595 282 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMC6-201ENST00000351948 ARIH2OSQ8N7S6 290 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 ALKBH3Q96Q83 286 aaPredicted RBP12.47□□□□□ -0.41
SMC6-201ENST00000351948 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 IGHV5-10-1A0A0J9YXX1 117 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 SLC33A1O00400 549 aaPredicted RBP12.47□□□□□ -0.41
SMC6-201ENST00000351948 CBX7O95931 251 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 CALCBP10092 127 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 CALHM3Q86XJ0 350 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 LAX1Q8IWV1 398 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 THAP7Q9BT49 309 aaPredicted RBP12.47□□□□□ -0.41
SMC6-201ENST00000351948 NDRG4Q9ULP0 352 aaKnown RBP12.47□□□□□ -0.41
SMC6-201ENST00000351948 TMEM212A6NML5 194 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 TRAPPC2LH3BP13 241 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 LILRB5O75023 590 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 DNAJB6O75190 326 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 SDHAP31040 664 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 NPSR1Q6W5P4 371 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 GPR32P1Q8NGA4 272 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 ENY2Q9NPA8 101 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 OR52A1Q9UKL2 312 aa12.47□□□□□ -0.41
SMC6-201ENST00000351948 TRGV8A0A0C4DH27 118 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 PRRG2O14669 202 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 NKX2-2O95096 273 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 MT-ND4P03905 459 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 SCG5P05408 212 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 ALKBH1Q13686 389 aaKnown RBP12.46□□□□□ -0.41
SMC6-201ENST00000351948 ACER2Q5QJU3 275 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 RHBDD2Q6NTF9 364 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 SYT9Q86SS6 491 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 KLHDC8BQ8IXV7 354 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 ST8SIA1Q92185 356 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 CMC2Q9NRP2 79 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 C20orf141Q9NUB4 165 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 SIRT5Q9NXA8 310 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 CGGBP1Q9UFW8 167 aaPredicted RBP12.46□□□□□ -0.41
SMC6-201ENST00000351948 PCDHB10Q9UN67 800 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 ZNF736B4DX44 427 aaPredicted RBP12.46□□□□□ -0.41
SMC6-201ENST00000351948 SGCEO43556 437 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 Q499Y3 187 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 BAIAP2L2Q6UXY1 529 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 KANSL1Q7Z3B3 1105 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 FAM71CQ8NEG0 241 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 LGALS14Q8TCE9 139 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 SLC6A15Q9H2J7 730 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 FKBP14Q9NWM8 211 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 MYOTQ9UBF9 498 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 GPRIN2O60269 458 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 TNFSF4P23510 183 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 LCN1P31025 176 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 TMPRSS7Q7RTY8 843 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 SPACA5Q96QH8 159 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 IER2Q9BTL4 223 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 NTN4Q9HB63 628 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 SIRT3Q9NTG7 399 aaPredicted RBP12.46□□□□□ -0.41
SMC6-201ENST00000351948 TMEM74BQ9NUR3 256 aa12.46□□□□□ -0.41
SMC6-201ENST00000351948 A4GNTQ9UNA3 340 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms