RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 ANXA2P07355 339 aaKnown RBP16.96■□□□□ 0.31
SCARF1-202ENST00000348987 ZNF888P0CJ79 500 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-202ENST00000348987 IGFALSP35858 605 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 GPR143P51810 404 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 RUNX3Q13761 415 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 MRPL2Q5T653 305 aaKnown RBP16.96■□□□□ 0.31
SCARF1-202ENST00000348987 ACOT7LQ6ZUV0 252 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 GTPBP8Q8N3Z3 284 aaPredicted RBP16.96■□□□□ 0.31
SCARF1-202ENST00000348987 OR1J4Q8NGS1 313 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 PHOSPHO1Q8TCT1 267 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 ELP5Q8TE02 316 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 PPP1R1CQ8WVI7 109 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 FBXO17Q96EF6 278 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 MRI1Q9BV20 369 aa16.96■□□□□ 0.31
SCARF1-202ENST00000348987 A0A1W2PQU0 124 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 LAMP2P13473 410 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 AK4P27144 223 aaPredicted RBP16.96■□□□□ 0.3
SCARF1-202ENST00000348987 ATP1B3P54709 279 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF425Q6IV72 752 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 MFSD12Q6NUT3 480 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 OR5M8Q8NGP6 311 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 OR14C36Q8NHC7 312 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 ZCCHC10Q8TBK6 192 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 CNTNAP3BQ96NU0 1288 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 TIMM29Q9BSF4 260 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 SLITRK2Q9H156 845 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 C1orf198Q9H425 327 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 FBXO34Q9NWN3 711 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 TBC1D29Q9UFV1 150 aa16.96■□□□□ 0.3
SCARF1-202ENST00000348987 TRAV18A0A075B6X5 111 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 A0A1B0GVT2 93 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 TMEM82A0PJX8 343 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 GGT3PA6NGU5 568 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 PRR32B1ATL7 298 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 RAD1O60671 282 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ITGB2P05107 769 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ECH1Q13011 328 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 OR7A5Q15622 319 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 CEBPEQ15744 281 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 DUSP5Q16690 384 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 STEAP1BQ6NZ63 245 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF813Q6ZN06 617 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 NDUFAF7Q7L592 441 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 LRRTM1Q86UE6 522 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 POMGNT2Q8NAT1 580 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 OR1J2Q8NGS2 313 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 OR6K6Q8NGW6 343 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 CPNE2Q96FN4 548 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ALX4Q9H161 411 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-202ENST00000348987 SFXN1Q9H9B4 322 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 SLC17A4Q9Y2C5 497 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 DUXAA6NLW8 204 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF705EA8MWA4 302 aaPredicted RBP16.95■□□□□ 0.3
SCARF1-202ENST00000348987 C5orf67F2Z3F1 127 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 PEX12O00623 359 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 LINC01565O15544 149 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 S100A8P05109 93 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 CASRP41180 1078 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 RAB5BP61020 215 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 SGCGQ13326 291 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 DEFB134Q4QY38 66 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ARHGAP11AQ6P4F7 1023 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ZSCAN1Q8NBB4 408 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 OR4A4PQ8NGN8 299 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 CCL4L1Q8NHW4 92 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 CCDC107Q8WV48 283 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 EDARADDQ8WWZ3 215 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 INTS12Q96CB8 462 aaKnown RBP16.95■□□□□ 0.3
SCARF1-202ENST00000348987 HSPA12BQ96MM6 686 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 KCNK15Q9H427 330 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 STEAP1Q9UHE8 339 aa16.95■□□□□ 0.3
SCARF1-202ENST00000348987 ZNF860A6NHJ4 632 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 RNGTTO60942 597 aaKnown RBP16.94■□□□□ 0.3
SCARF1-202ENST00000348987 FARS2O95363 451 aaKnown RBP16.94■□□□□ 0.3
SCARF1-202ENST00000348987 SLC25A4P12235 298 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 ABOP16442 354 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 CAPZA1P52907 286 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 DUSP8Q13202 625 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 KCNAB1Q14722 419 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 PON3Q15166 354 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 TRMT12Q53H54 448 aaKnown RBP16.94■□□□□ 0.3
SCARF1-202ENST00000348987 EIPR1Q53HC9 387 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 LIPNQ5VXI9 398 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 NKAIN2Q5VXU1 208 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 MFSD9Q8NBP5 474 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 OR51D1Q8NGF3 324 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 Q96M85 177 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 YBX2Q9Y2T7 364 aaKnown RBP16.94■□□□□ 0.3
SCARF1-202ENST00000348987 COLCA2A8K830 154 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 GPR89AB7ZAQ6 455 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 CTAG2O75638 210 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 GPR89BP0CG08 455 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 LIPCP11150 499 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 SLC6A6P31641 620 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 SMCO1Q147U7 214 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 ENPP7Q6UWV6 458 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 RD3Q7Z3Z2 195 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 BIVMQ86UB2 503 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 NRROSQ86YC3 692 aa16.94■□□□□ 0.3
SCARF1-202ENST00000348987 OR4K14Q8NGD5 310 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms