RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 OR2G2Q8NGZ5 317 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF671Q8TAW3 534 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF431Q8TF32 576 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 THEM6Q8WUY1 208 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CCDC74AQ96AQ1 378 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 ARL5BQ96KC2 179 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 SORCS2Q96PQ0 1159 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 FOXQ1Q9C009 403 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 LMAN2LQ9H0V9 348 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 NPDC1Q9NQX5 325 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-201ENST00000347613 RXFP3Q9NSD7 469 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 C14orf105Q9NVL8 296 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 RPS6KB2Q9UBS0 482 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 CTSFQ9UBX1 484 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 SPACA6W5XKT8 324 aa5.45□□□□□ -1.54
CLCN3-201ENST00000347613 MEIKINA0A087WXM9 373 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ELOA3DA6NLF2 546 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 CENPBD1B2RD01 187 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 PYCARD-AS1I3L0S3 204 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF264O43296 627 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 GSTZ1O43708 216 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 IL33O95760 270 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 H2AFB2P0C5Z0 115 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TALDO1P37837 337 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 H2BFSP57053 126 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ALKBH1Q13686 389 aaKnown RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ZNHIT3Q15649 155 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 CLPPQ16740 277 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ELOA3BQ3SY89 546 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SLC22A6Q4U2R8 563 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 UBE2NLQ5JXB2 153 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF550Q7Z398 422 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ADGRG3Q86Y34 549 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 PLCZ1Q86YW0 608 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ELMOD2Q8IZ81 293 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 POMGNT2Q8NAT1 580 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ELOA3Q8NG57 546 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 OR8H1Q8NGG4 311 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 OR6N2Q8NGY6 317 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 MICU1Q9BPX6 476 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 GON7Q9BXV9 100 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 DPAGT1Q9H3H5 408 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 CACYBPQ9HB71 228 aaKnown RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SOHLH2Q9NX45 425 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ING3Q9NXR8 418 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 CA14Q9ULX7 337 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 MRPS18BQ9Y676 258 aaKnown RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM272A0A1B0GTI8 110 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM150CB9EJG8 249 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 MASP2O00187 686 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SIGLEC5O15389 551 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 HCRTR2O43614 444 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 IFNGP01579 166 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 BCKDHBP21953 392 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 FASLGP48023 281 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ACTC1P68032 377 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ACTA1P68133 377 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SIGLEC14Q08ET2 396 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 EBPQ15125 230 aaKnown RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 WBP2NLQ6ICG8 309 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 CORO6Q6QEF8 472 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 BTN2A1Q7KYR7 527 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SLC16A9Q7RTY1 509 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 C17orf82Q86X59 251 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SLC25A45Q8N413 288 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 LIPHQ8WWY8 451 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM106AQ96A25 262 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 C8orf44Q96CB5 159 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TCTN2Q96GX1 697 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 FANCFQ9NPI8 374 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ABRACLQ9P1F3 81 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 RHBDD3Q9Y3P4 386 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 NUBP2Q9Y5Y2 271 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 MTCH2Q9Y6C9 303 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 V9GY05 133 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 RALGAPA1Q6GYQ0 2036 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 MYO7BQ6PIF6 2116 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TRBV5-7A0A0A0MS05 114 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ANKRD20A5PA0PJZ0 165 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 FITM1A5D6W6 292 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 C5orf63A6NC05 138 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TMEM200CA6NKL6 621 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SMAD9O15198 467 aaKnown RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TSPAN2O60636 221 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ABCD3P28288 659 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TAS2R43P59537 309 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 TAS2R20P59543 309 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 EXOSC2Q13868 293 aaKnown RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 CBFBQ13951 182 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 EEF1A1P5Q5VTE0 462 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 OR7E24Q6IFN5 339 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ZNF574Q6ZN55 896 aaPredicted RBP5.44□□□□□ -1.54
CLCN3-201ENST00000347613 DNM1P46Q6ZS02 220 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 SLC38A6Q8IZM9 456 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 OR5M1Q8NGP8 315 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 OR5AK2Q8NH90 309 aa5.44□□□□□ -1.54
CLCN3-201ENST00000347613 ADAMTS14Q8WXS8 1223 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms