RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 MLLT11Q13015 90 aaPredicted RBP9.79□□□□□ -0.84
ECM1-201ENST00000346569 ETFDHQ16134 617 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 SSX1Q16384 188 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 CTF1Q16619 201 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 HIST3H3Q16695 136 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 HBMQ6B0K9 141 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 ZNF322Q6U7Q0 402 aaPredicted RBP9.79□□□□□ -0.84
ECM1-201ENST00000346569 LYPD4Q6UWN0 246 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 CREB3L2Q70SY1 520 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 TRILQ7L0X0 811 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 SLC16A9Q7RTY1 509 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 ATCAYQ86WG3 371 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 EGFL6Q8IUX8 553 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 ALDH16A1Q8IZ83 802 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 FAM109AQ8N4B1 249 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 KLHL36Q8N4N3 616 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 OR10D3Q8NH80 312 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 SMAP2Q8WU79 429 aaPredicted RBP9.79□□□□□ -0.84
ECM1-201ENST00000346569 RAB2BQ8WUD1 216 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 GATAD2BQ8WXI9 593 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 SLC25A44Q96H78 314 aaPredicted RBP9.79□□□□□ -0.84
ECM1-201ENST00000346569 BCL7BQ9BQE9 202 aa9.79□□□□□ -0.84
ECM1-201ENST00000346569 SF3B5Q9BWJ5 86 aaKnown RBP9.79□□□□□ -0.84
ECM1-201ENST00000346569 IGHV3-15A0A0B4J1V0 119 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 IGKV1D-43A0A0B4J1Z2 117 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 TMEM8BA6NDV4 472 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 CENPBD1B2RD01 187 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 K7ENP7 123 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 CCRL2O00421 344 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SMAD9O15198 467 aaKnown RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 CXCL13O43927 109 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SELENOFO60613 162 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SLC16A7O60669 478 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 LALBAP00709 142 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 ITGB2P05107 769 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 HSMCR30P0CW71 290 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 PGA4P0DJD7 388 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 PGA3P0DJD8 388 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 ZNF708P17019 499 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 POU3F2P20265 443 aaPredicted RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 BLVRAP53004 296 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 C1DQ13901 141 aaKnown RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 TSTQ16762 297 aaKnown RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 THEM4Q5T1C6 240 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 PDSS1Q5T2R2 415 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 ZNF684Q5T5D7 378 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 VASNQ6EMK4 673 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 INO80CQ6PI98 192 aaPredicted RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 SSX6Q7RTT6 188 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 P2RY8Q86VZ1 359 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 PHC2Q8IXK0 858 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SLC35F2Q8IXU6 374 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SYT14Q8NB59 555 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 OR10H4Q8NGA5 316 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 OR6K6Q8NGW6 343 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 NEIL3Q8TAT5 605 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SPRYD4Q8WW59 207 aaPredicted RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 ABTB1Q969K4 478 aaPredicted RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 RBP7Q96R05 134 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 CNN2Q99439 309 aaKnown RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 ALG8Q9BVK2 526 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 YIPF3Q9GZM5 350 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SLC6A15Q9H2J7 730 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 ISG20L2Q9H9L3 353 aaKnown RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 BABAM2Q9NXR7 383 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 COPS3Q9UNS2 423 aa9.78□□□□□ -0.84
ECM1-201ENST00000346569 SF3B6Q9Y3B4 125 aaKnown RBP9.78□□□□□ -0.84
ECM1-201ENST00000346569 ZNF716A6NP11 495 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ZNF432O94892 652 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 GPANK1O95872 356 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ACTL6AO96019 429 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 IGHG3P01860 377 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 CPEP16870 476 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 PCSK6P29122 969 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 NAA10P41227 235 aaPredicted RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 ZNF133P52736 654 aaPredicted RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 ACTC1P68032 377 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ACTA1P68133 377 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 BDH1Q02338 343 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 AQP6Q13520 282 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 CAMK2DQ13557 499 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 LRFN4Q6PJG9 635 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 SLC25A47Q6Q0C1 308 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 TMPRSS11AQ6ZMR5 421 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 Q6ZS92 163 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 GPAT4Q86UL3 456 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 CDC20BQ86Y33 519 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ERI1Q8IV48 349 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 UBQLNLQ8IYU4 475 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ZADH2Q8N4Q0 377 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 OR9K2Q8NGE7 335 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 RPL3LQ92901 407 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 CPNE4Q96A23 557 aaPredicted RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 ZHX1-C8orf76Q96EF9 292 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 ADAD1Q96M93 576 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 ZNF385AQ96PM9 386 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 TBX5Q99593 518 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 DEFB127Q9H1M4 99 aa9.77□□□□□ -0.85
ECM1-201ENST00000346569 CCDC86Q9H6F5 360 aaKnown RBP9.77□□□□□ -0.85
ECM1-201ENST00000346569 WDR76Q9H967 626 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms