RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 PLEKHJ1Q9NW61 149 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 UBQLN2Q9UHD9 624 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 A8MVM7 634 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 CRTAPO75718 401 aaPredicted RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 ZGLP1P0C6A0 271 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 MFAP5Q13361 173 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 MRPL2Q5T653 305 aaKnown RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 GRINAQ7Z429 371 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 LSM14AQ8ND56 463 aaKnown RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 OR5H2Q8NGV7 314 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 CREB3L1Q96BA8 519 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 HYLS1Q96M11 299 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 LMF1Q96S06 567 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 LRRC61Q9BV99 259 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 BABAM2Q9NXR7 383 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 LGI1O95970 557 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 IFNA1P01562 189 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SOX18P35713 384 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SRP9P49458 86 aaKnown RBP9.98□□□□□ -0.81
CLCN6-202ENST00000346436 TSPAN31Q12999 210 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 KCNAB1Q14722 419 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF718Q3SXZ3 478 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 GUSBP11Q6P575 273 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SLC35F2Q8IXU6 374 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 OPALINQ96PE5 141 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 SLA2Q9H6Q3 261 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 A4GALTQ9NPC4 353 aa9.98□□□□□ -0.81
CLCN6-202ENST00000346436 TVP23AA6NH52 213 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 H7C2Y5 167 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 SPINT2O43291 252 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 LCMT2O60294 686 aaKnown RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 SLC34A2O95436 690 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 FCRL6Q6DN72 434 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 Q6ZNB5 142 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GALNT16Q8N428 558 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 NANOGP1Q8N7R0 232 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 SLC16A11Q8NCK7 471 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 DOK1Q99704 481 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 DIMT1Q9UNQ2 313 aaKnown RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 ANKRD61A6NGH8 418 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GAPDHSO14556 408 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 CBR3O75828 277 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 CD53P19397 219 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GABRA5P31644 462 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 RAE1P78406 368 aaKnown RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 FAM53BQ14153 422 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 BAK1Q16611 211 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 FAM109BQ6ICB4 259 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 MEPCEQ7L2J0 689 aaKnown RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 LRRC18Q8N456 261 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 TMEM171Q8WVE6 324 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 CORO2AQ92828 525 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF285Q96NJ3 590 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 LYSMD1Q96S90 227 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 METTL9Q9H1A3 318 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 DUSP15Q9H1R2 295 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 HHLA2Q9UM44 414 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 NRG2O14511 850 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 CDK2P24941 298 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 TEAD1P28347 426 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 CSNK1G2P78368 415 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 MSMO1Q15800 293 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 SLC6A19Q695T7 634 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 TCTN3Q6NUS6 607 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GPR155Q7Z3F1 870 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GPR148Q8TDV2 347 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 ARL6Q9H0F7 186 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 TSPAN10Q9H1Z9 355 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 SLC23A2Q9UGH3 650 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 ZAR1LA6NP61 321 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GALR2O43603 387 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 MT-ATP6P00846 226 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 P2RX1P51575 399 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 GALEQ14376 348 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 WDSUB1Q8N9V3 476 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF775Q96BV0 537 aaPredicted RBP9.97□□□□□ -0.81
CLCN6-202ENST00000346436 C7orf34Q96L11 122 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 NUDT22Q9BRQ3 303 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 PLSCR3Q9NRY6 295 aa9.97□□□□□ -0.81
CLCN6-202ENST00000346436 ARPC1BO15143 372 aaKnown RBP9.96□□□□□ -0.81
CLCN6-202ENST00000346436 SHOXO15266 292 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 IFNA2P01563 188 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 APOA2P02652 100 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 EDDM3BP56851 147 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 CLN3Q13286 438 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 LYPD4Q6UWN0 246 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 DPPA2Q7Z7J5 298 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 COMMD7Q86VX2 200 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF454Q8N9F8 522 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF417Q8TAU3 575 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 ZNF587Q96SQ5 575 aaPredicted RBP9.96□□□□□ -0.81
CLCN6-202ENST00000346436 OR51J1Q9H342 316 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 GSKIPQ9P0R6 139 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 MCRIP1C9JLW8 97 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 ATXN7O15265 892 aaPredicted RBP9.96□□□□□ -0.81
CLCN6-202ENST00000346436 SLC2A5P22732 501 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 CCDC58Q4VC31 144 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 BBS1Q8NFJ9 593 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 AKR1E2Q96JD6 320 aa9.96□□□□□ -0.81
CLCN6-202ENST00000346436 CHRNB1P11230 501 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 321.3 ms