RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ZNF17P17021 662 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 GKP32189 559 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 GGT2P36268 569 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 EVX1P49640 407 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 RAB38P57729 211 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 RAB2AP61019 212 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 FUT7Q11130 342 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 HNRNPA0Q13151 305 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 MAD2L1Q13257 205 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 DOC2AQ14183 400 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 KRT33BQ14525 404 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 ELAVL1Q15717 326 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CLEC6AQ6EIG7 209 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CNIH2Q6PI25 160 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CLEC2AQ6UVW9 174 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 FJX1Q86VR8 437 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF383Q8NA42 475 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 RCBTB1Q8NDN9 531 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CDKN2AIPNLQ96HQ2 116 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 TAAR6Q96RI8 345 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 TSNAXQ99598 290 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 KCNK6Q9Y257 313 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 LSM2Q9Y333 95 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 DNAJC15Q9Y5T4 150 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 A0A087X1B8 175 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 A8MT66 165 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 C1orf196B1AJZ1 125 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 MCRIP1C9JLW8 97 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 ETV2O00321 342 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 TBX19O60806 448 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 AQP8O94778 261 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 SIX6O95475 246 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 FSTL3O95633 263 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 OR8U8P0C7N1 319 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 C8orf89P0DMQ9 161 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 SLC2A1P11166 492 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 HIST1H1TP22492 207 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 NFYAP23511 347 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 DDTP30046 118 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 GSK3AP49840 483 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 RAB10P61026 200 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 SH3BP2P78314 561 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 P2RY14Q15391 338 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CNN3Q15417 329 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM255AQ5JRV8 349 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 SFRP5Q5T4F7 317 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 ZCCHC12Q6PEW1 402 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 FAM122BQ7Z309 247 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF567Q8N184 647 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 OR2L5Q8NG80 312 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 SPATA22Q8NHS9 363 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 METTL21AQ8WXB1 218 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 L3HYPDHQ96EM0 354 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 TEX37Q96LM6 180 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 MS4A4EQ96PG1 132 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 PKP4Q99569 1192 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 PLEKHF2Q9H8W4 249 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 AIG1Q9NVV5 245 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CNOT2Q9NZN8 540 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 OSGIN2Q9Y236 505 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 CHST2Q9Y4C5 530 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 PCYT1BQ9Y5K3 369 aaPredicted RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 MRPS18BQ9Y676 258 aaKnown RBP6.6□□□□□ -1.35
ZNF540-202ENST00000343599 KIF26BQ2KJY2 2108 aa6.6□□□□□ -1.35
ZNF540-202ENST00000343599 USP34Q70CQ2 3546 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 METTL21EPA6NDL7 271 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 CCL21O00585 134 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 OIP5O43482 229 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 FOXS1O43638 330 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 SC5DO75845 299 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 CATP04040 527 aaKnown RBP6.59□□□□□ -1.35
ZNF540-202ENST00000343599 PSMA1P25786 263 aaKnown RBP6.59□□□□□ -1.35
ZNF540-202ENST00000343599 G0S2P27469 103 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 PMELP40967 661 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 CCR9P51686 369 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 POLR2JP52435 117 aaKnown RBP6.59□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF239Q16600 458 aaKnown RBP6.59□□□□□ -1.35
ZNF540-202ENST00000343599 GSG1Q2KHT4 349 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF730Q6ZMV8 503 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 MBOAT1Q6ZNC8 495 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM91Q6ZNR0 172 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 THAP6Q8TBB0 222 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 SLAMF9Q96A28 289 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 SLC25A36Q96CQ1 311 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 ELMOD3Q96FG2 381 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 MARS2Q96GW9 593 aaKnown RBP6.59□□□□□ -1.35
ZNF540-202ENST00000343599 THOC3Q96J01 351 aaKnown RBP6.59□□□□□ -1.35
ZNF540-202ENST00000343599 KLHL31Q9H511 634 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 GFOD1Q9NXC2 390 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 A0A087WZY1 265 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM218A2RU14 115 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 SMPD2O60906 423 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 CDRT1O95170 752 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 PEPDP12955 493 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 S100A11P31949 105 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 BCL6P41182 706 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 INPP1P49441 399 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 SELENOPP49908 381 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 ARG2P78540 354 aa6.59□□□□□ -1.35
ZNF540-202ENST00000343599 NHLH2Q02577 135 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms