RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 F8W036 122 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CDC42EP2O14613 210 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 LAMTOR5O43504 91 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 NKX2-2O95096 273 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 EPXP11678 715 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ZNF35P13682 527 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 BLOC1S1P78537 153 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 KCNAB1Q14722 419 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 VWA2Q5GFL6 755 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 CLVS2Q5SYC1 327 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 SGPP2Q8IWX5 399 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 OR51S1Q8NGJ8 323 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 OR6F1Q8NGZ6 308 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 NAT6Q93015 286 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 DCBLD2Q96PD2 775 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ULBP2Q9BZM5 246 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 OR11A1Q9GZK7 315 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 LDAHQ9H6V9 325 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 B3GNT2Q9NY97 397 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 GLTPQ9NZD2 209 aa6.58□□□□□ -1.36
VCAN-202ENST00000342785 ING1Q9UK53 422 aaPredicted RBP6.58□□□□□ -1.36
VCAN-202ENST00000342785 AGPAT2O15120 278 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 RPS15P62841 145 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 MESP2Q0VG99 397 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 DYRK1AQ13627 763 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 OTPQ5XKR4 325 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 THSD4Q6ZMP0 1018 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ARL11Q969Q4 196 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 SLC25A21Q9BQT8 299 aaPredicted RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 TMEM59Q9BXS4 323 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 NUDT21O43809 227 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 HYAL3O43820 417 aaPredicted RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 MOSPD3O75425 235 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 S100A11P31949 105 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 GFERP55789 205 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ZNF425Q6IV72 752 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FAM57BQ71RH2 274 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 PRSS41Q7RTY9 318 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 UBE3DQ7Z6J8 389 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 KCNG3Q8TAE7 436 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 NT5CQ8TCD5 201 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FGGYQ96C11 551 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ZNF764Q96H86 408 aaPredicted RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 MRPS2Q9Y399 296 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 DOCK5Q9H7D0 1870 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 CACNA1EQ15878 2313 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 HOXB5P09067 269 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 OR8U9P0C7N5 309 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 SLC2A1P11166 492 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ATF1P18846 271 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ANXA7P20073 488 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 CDK2P24941 298 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 EMDP50402 254 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FAM53BQ14153 422 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 SLC9A3R2Q15599 337 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 C14orf28Q4W4Y0 310 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ARSKQ6UWY0 536 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 KANSL1Q7Z3B3 1105 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 DCXRQ7Z4W1 244 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 TRAPPC6BQ86SZ2 158 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 IL22RA1Q8N6P7 574 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 GCDHQ92947 438 aaPredicted RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 SLCO5A1Q9H2Y9 848 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FBXL4Q9UKA2 621 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 OR52A1Q9UKL2 312 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 LSM5Q9Y4Y9 91 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 CNOT1A5YKK6 2376 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 A0A0A6YYH2 397 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FAM230AA0A1W2PPH8 454 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 A6NJ64 397 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ARPC3O15145 178 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 INHBBP09529 407 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 UBBP0CG47 229 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 UBCP0CG48 685 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 CALCBP10092 127 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 THBS2P35442 1172 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 CAPZBP47756 277 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FGL2Q14314 439 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 TMEM81Q6P7N7 255 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 SSX6Q7RTT6 188 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 MISPQ8IVT2 679 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 FNDC9Q8TBE3 224 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 LRRC3BQ96PB8 259 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 AIFM2Q9BRQ8 373 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 EMC6Q9BV81 110 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 ZNF346Q9UL40 294 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 FLVCR2Q9UPI3 526 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 EXO1Q9UQ84 846 aaKnown RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 SPTY2D1-AS1A0A0U1RR47 76 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 CLDN6P56747 220 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 H1FNTQ75WM6 255 aaPredicted RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 ZNF100Q8IYN0 542 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 SMIM4Q8WVI0 70 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 PELI1Q96FA3 418 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 TCEAL2Q9H3H9 227 aaPredicted RBP6.57□□□□□ -1.36
VCAN-202ENST00000342785 AUNIPQ9H7T9 357 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 A0A0B4J2E0 115 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 A0A1B0GV50 99 aa6.57□□□□□ -1.36
VCAN-202ENST00000342785 A0A1B0GX12 115 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms