RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 PTPRZ1P23471 2315 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-202ENST00000342494 Q96M85 177 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 WDR37Q9Y2I8 494 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 SSX4O60224 188 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 ALPLP05186 524 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 ZNF728P0DKX0 622 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 BCKDHBP21953 392 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 ETV6P41212 452 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 ARL16Q0P5N6 197 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 PRTGQ2VWP7 1150 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 RBMS3Q6XE24 437 aaKnown RBP13.78□□□□□ -0.2
UBE3B-202ENST00000342494 SEMA6DQ8NFY4 1073 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 UTP4Q969X6 686 aaKnown RBP13.78□□□□□ -0.2
UBE3B-202ENST00000342494 CHST11Q9NPF2 352 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 C1orf123Q9NWV4 160 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 MYH8P13535 1937 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 CSO75390 466 aaKnown RBP13.78□□□□□ -0.2
UBE3B-202ENST00000342494 CHATP28329 748 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 HTR1FP30939 366 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 NKX2-5P52952 324 aaPredicted RBP13.78□□□□□ -0.2
UBE3B-202ENST00000342494 COMMD7Q86VX2 200 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 BCORP1Q8N888 145 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 SHARPINQ9H0F6 387 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 GNB4Q9HAV0 340 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
UBE3B-202ENST00000342494 TMEM82A0PJX8 343 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 GLCEO94923 617 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 HSF1Q00613 529 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 ATPAF1Q5TC12 328 aaPredicted RBP13.77□□□□□ -0.2
UBE3B-202ENST00000342494 IDO2Q6ZQW0 420 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 NAXDQ8IW45 347 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 TSLPQ969D9 159 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 IER2Q9BTL4 223 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 UFSP2Q9NUQ7 469 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 CCDC187A0A096LP49 1063 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 KLK10O43240 276 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 FGF17O60258 216 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 MED6O75586 246 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 GNB2P62879 340 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 DUSP2Q05923 314 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 FAPQ12884 760 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 HLA-BQ31612 363 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 SLC35D3Q5M8T2 416 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 KMT5CQ86Y97 462 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 KCTD12Q96CX2 325 aaKnown RBP13.77□□□□□ -0.2
UBE3B-202ENST00000342494 MVB12AQ96EY5 273 aa13.77□□□□□ -0.2
UBE3B-202ENST00000342494 M0R1B8 84 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 OMGP23515 440 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 TEAD1P28347 426 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 RPS25P62851 125 aaKnown RBP13.77□□□□□ -0.21
UBE3B-202ENST00000342494 SRPXP78539 464 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF468Q5VIY5 522 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-202ENST00000342494 DESI1Q6ICB0 168 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 SUMF2Q8NBJ7 301 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 LGALS14Q8TCE9 139 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 HAS2Q92819 552 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 CPNE4Q96A23 557 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-202ENST00000342494 SEMA4GQ9NTN9 838 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 METTL12A8MUP2 240 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 RFPL3O75679 317 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 SELENBP1Q13228 472 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 KIRREL1Q96J84 757 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 NUP98P52948 1817 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 A0A1W2PR48 441 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 APOA2P02652 100 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 TNFSF8P32971 234 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 NKAIN3Q8N8D7 197 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 ZNF419Q96HQ0 510 aaPredicted RBP13.77□□□□□ -0.21
UBE3B-202ENST00000342494 UHRF2Q96PU4 802 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 LYSMD1Q96S90 227 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 C20orf27Q9GZN8 174 aa13.77□□□□□ -0.21
UBE3B-202ENST00000342494 ANXA7P20073 488 aaKnown RBP13.76□□□□□ -0.21
UBE3B-202ENST00000342494 GFERP55789 205 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 TEKQ02763 1124 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 CGB2Q6NT52 195 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 SLC38A1Q9H2H9 487 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 WBP1LQ9NX94 342 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 TIMM10BQ9Y5J6 103 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 CNTRLQ7Z7A1 2325 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 K7EPK0 472 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 GMDSO60547 372 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 EMP3P54852 163 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 HBG1P69891 147 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 HBG2P69892 147 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 BAXQ07812 192 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 LSAMPQ13449 338 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 FAM71E2Q8N5Q1 922 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 BEST4Q8NFU0 473 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 PFN4Q8NHR9 129 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 ST7LQ8TDW4 575 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 A0A1W2PNR3 127 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 LGALS8O00214 317 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 SELENOFO60613 162 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 TRIM23P36406 574 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 PPICP45877 212 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 ACSM1Q08AH1 577 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 RBMS2Q15434 407 aaKnown RBP13.76□□□□□ -0.21
UBE3B-202ENST00000342494 PLK5Q496M5 336 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 YIF1BQ5BJH7 314 aa13.76□□□□□ -0.21
UBE3B-202ENST00000342494 SLC35G3Q8N808 338 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms