RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 IL3RAP26951 378 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 PTGER4P35408 488 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 CD97P48960 835 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 SEC61A1P61619 476 aaKnown RBP11.64□□□□□ -0.55
LIN54-201ENST00000340417 RAC1P63000 192 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 GPR176Q14439 515 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 EBPQ15125 230 aaKnown RBP11.64□□□□□ -0.55
LIN54-201ENST00000340417 FOXRED2Q8IWF2 684 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 OR2L13Q8N349 312 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 WDR34Q96EX3 536 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 INPP5EQ9NRR6 644 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 COPZ2Q9P299 210 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 IL17BQ9UHF5 180 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 TRAPPC2LQ9UL33 140 aa11.64□□□□□ -0.55
LIN54-201ENST00000340417 ABCD4O14678 606 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 CYB5BO43169 146 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 GSTT2P0CG29 244 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 RBMXP38159 391 aaKnown RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 ETV5P41161 510 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 CX3CR1P49238 355 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 ART1P52961 327 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 ZNF117Q03924 483 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 C19orf57Q0VDD7 668 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 CRMP1Q14194 572 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 RBM45Q8IUH3 476 aaKnown RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 ADGRG5Q8IZF4 528 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 NARFLQ9H6Q4 476 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 MOV10Q9HCE1 1003 aaKnown RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 A0A1W2PR80 420 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 C1orf185Q5T7R7 199 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 HES5Q5TA89 166 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 RNF170Q96K19 258 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 SLC6A7Q99884 636 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 ACOT13Q9NPJ3 140 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 B3GNT2Q9NY97 397 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 RBBP9O75884 186 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 LYZL6O75951 148 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 NKX2-2O95096 273 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 PRPH2P23942 346 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 RAB40BQ12829 278 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 MPEG1Q2M385 716 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 C10orf90Q96M02 699 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 PTTG3PQ9NZH4 202 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 GPR55Q9Y2T6 319 aaPredicted RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 HSPB6O14558 160 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 EDDM3AQ14507 147 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 SWI5Q1ZZU3 235 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 FOXRED1Q96CU9 486 aaPredicted RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 GNG12Q9UBI6 72 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 OSGIN1Q9UJX0 560 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 MGAT4AQ9UM21 535 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 UBE2J1Q9Y385 318 aaPredicted RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 LRRN3E7EW58 273 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 OR7C1O76099 320 aaPredicted RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 PEBP1P30086 187 aaKnown RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 SRP9P49458 86 aaKnown RBP11.63□□□□□ -0.55
LIN54-201ENST00000340417 WNT4P56705 351 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 DUSP7Q16829 419 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 GSG1Q2KHT4 349 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 PDSS2Q86YH6 399 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 SULF2Q8IWU5 870 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 OR1J1Q8NGS3 322 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 NDNFQ8TB73 568 aa11.63□□□□□ -0.55
LIN54-201ENST00000340417 SLC19A2O60779 497 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 MAKP20794 623 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 RPL18Q07020 188 aaKnown RBP11.62□□□□□ -0.55
LIN54-201ENST00000340417 TUBA3CQ13748 450 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 CSNK2A3Q8NEV1 391 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 RAB1BQ9H0U4 201 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 ASH2LQ9UBL3 628 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 IGHV3-64DA0A0J9YX35 117 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 DHHO43323 396 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 CD96P40200 585 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 AKR1C2P52895 323 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 ERVK13-1Q9NX77 482 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 MGAMO43451 1857 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 TEX46H3BTG2 121 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 PPIHO43447 177 aaKnown RBP11.62□□□□□ -0.55
LIN54-201ENST00000340417 KIAA0513O60268 411 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 SORBS2O94875 1100 aaKnown RBP11.62□□□□□ -0.55
LIN54-201ENST00000340417 CCL3P10147 92 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 UNQ6494/PRO21346Q6UXR6 183 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 BHLHA15Q7RTS1 189 aaPredicted RBP11.62□□□□□ -0.55
LIN54-201ENST00000340417 ZNF441Q8N8Z8 693 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 ZNF511Q8NB15 262 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 ZBTB44Q8NCP5 570 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 OR5H2Q8NGV7 314 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 ZNF355PQ9NSJ1 428 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 PIGLQ9Y2B2 252 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 A0A1B0GUH1 482 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 S100A10P60903 97 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 PMP22Q01453 160 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 SLC25A18Q9H1K4 315 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 NKX1-2Q9UD57 310 aaPredicted RBP11.62□□□□□ -0.55
LIN54-201ENST00000340417 EXO1Q9UQ84 846 aaKnown RBP11.62□□□□□ -0.55
LIN54-201ENST00000340417 PCDHGA3Q9Y5H0 932 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 IGHV1-45A0A0A0MS14 117 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 MCRIP1C9JLW8 97 aa11.62□□□□□ -0.55
LIN54-201ENST00000340417 P2RY10O00398 339 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms