RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 RSPO4Q2I0M5 234 aaPredicted RBP9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 DRAXINQ8NBI3 349 aaPredicted RBP9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 HOXB13Q92826 284 aaPredicted RBP9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 SPACA9Q96E40 222 aaPredicted RBP9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 SLITRK2Q9H156 845 aa9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 PTGES2Q9H7Z7 377 aa9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 BOD1L1Q8NFC6 3051 aa9.16□□□□□ -0.94
RBFOX1-202ENST00000340209 B4DXG7 233 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 TACSTD2P09758 323 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 SPEM2Q0P670 501 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ZNF468Q5VIY5 522 aaPredicted RBP9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 DCXRQ7Z4W1 244 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 JAGN1Q8N5M9 183 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 FAM71CQ8NEG0 241 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 DDIT4LQ96D03 193 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 PGLYRP3Q96LB9 341 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 SERINC1Q9NRX5 453 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 NUFIP1Q9UHK0 495 aaKnown RBP9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 CEP295Q9C0D2 2601 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 TRABD2BA6NFA1 517 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ARPC3O15145 178 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 LANCL1O43813 399 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 WDPCPO95876 746 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 IGHV3-9P01782 118 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 FAAP20Q6NZ36 180 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 RPS19BP1Q86WX3 136 aaKnown RBP9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ESX1Q8N693 406 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 OR6N1Q8NGY5 312 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 SLC19A3Q9BZV2 496 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 B9D1Q9UPM9 204 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 WIF1Q9Y5W5 379 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 FKBP7Q9Y680 259 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 TP53I11O14683 189 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ADRB1P08588 477 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 PRKAR1AP10644 381 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 DPP4P27487 766 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 STARP49675 285 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 INSM1Q01101 510 aaPredicted RBP9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 SPOCK1Q08629 439 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 LINC01590Q5TEZ4 76 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 HBMQ6B0K9 141 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 NDUFAF7Q7L592 441 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 SLC16A9Q7RTY1 509 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 FAM122BQ7Z309 247 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 LRRC18Q8N456 261 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 MS4A15Q8N5U1 240 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 UXS1Q8NBZ7 420 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 NPRL2Q8WTW4 380 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 PTDSS2Q9BVG9 487 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 NXF2Q9GZY0 626 aaKnown RBP9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 SLC22A4Q9H015 551 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ABCG5Q9H222 651 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ZMAT3Q9HA38 289 aaKnown RBP9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 MED13Q9UHV7 2174 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 ST6GALNAC2Q9UJ37 374 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 PADI1Q9ULC6 663 aa9.15□□□□□ -0.94
RBFOX1-202ENST00000340209 FRYQ5TBA9 3013 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 IGKV1D-43A0A0B4J1Z2 117 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 ZNF879B4DU55 563 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 FGF9P31371 208 aaPredicted RBP9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 HSF1Q00613 529 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 SGCBQ16585 318 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 C9orf135Q5VTT2 229 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 RPL22L1Q6P5R6 122 aaKnown RBP9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 XKRXQ6PP77 449 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 NFAM1Q8NET5 270 aaPredicted RBP9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 ITFG2Q969R8 447 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 SPACA5Q96QH8 159 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 ADAM19Q9H013 955 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 AUNIPQ9H7T9 357 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 TBCCD1Q9NVR7 557 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 BOLA1Q9Y3E2 137 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 HS3ST3B1Q9Y662 390 aa9.15□□□□□ -0.95
RBFOX1-202ENST00000340209 OR6C76A6NM76 312 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 OR2T1O43869 369 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 FZD7O75084 574 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 SERPINA3P01011 423 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 ITGA3P26006 1051 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 UQCRC1P31930 480 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 CASP3P42574 277 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 MAP2K3P46734 347 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 SLC6A9P48067 706 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 RPS4XP62701 263 aaKnown RBP9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 GLO1Q04760 184 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 DMKNQ6E0U4 476 aaPredicted RBP9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 UEVLDQ8IX04 471 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 IL22RA1Q8N6P7 574 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 BEST4Q8NFU0 473 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 OR14L1PQ8NHC6 308 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 EXOSC3Q9NQT5 275 aaKnown RBP9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 INPP5EQ9NRR6 644 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 ZNF281Q9Y2X9 895 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 ZNF726A6NNF4 738 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 PLPP3O14495 311 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 PLPP2O43688 288 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 PTTG1O95997 202 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 MT-ND4P03905 459 aa9.14□□□□□ -0.95
RBFOX1-202ENST00000340209 ZNF43P17038 809 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms