RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 GPBAR1Q8TDU6 330 aa13.41□□□□□ -0.26
RET-201ENST00000340058 SPTSSAQ969W0 71 aa13.41□□□□□ -0.26
RET-201ENST00000340058 OR2B2Q9GZK3 357 aa13.41□□□□□ -0.26
RET-201ENST00000340058 CLEC1BQ9P126 229 aa13.41□□□□□ -0.26
RET-201ENST00000340058 MEMO1Q9Y316 297 aa13.41□□□□□ -0.26
RET-201ENST00000340058 PCP4L1A6NKN8 68 aa13.41□□□□□ -0.26
RET-201ENST00000340058 DVL2O14641 736 aa13.41□□□□□ -0.26
RET-201ENST00000340058 HTR5AP47898 357 aa13.41□□□□□ -0.26
RET-201ENST00000340058 BAK1Q16611 211 aa13.41□□□□□ -0.26
RET-201ENST00000340058 C1QL3Q5VWW1 255 aa13.41□□□□□ -0.26
RET-201ENST00000340058 TEX19Q8NA77 164 aa13.41□□□□□ -0.26
RET-201ENST00000340058 CCDC54Q8NEL0 328 aa13.41□□□□□ -0.26
RET-201ENST00000340058 APH1BQ8WW43 257 aa13.41□□□□□ -0.26
RET-201ENST00000340058 METTL17Q9H7H0 456 aaPredicted RBP13.41□□□□□ -0.26
RET-201ENST00000340058 RBFOX1Q9NWB1 397 aaKnown RBP13.41□□□□□ -0.26
RET-201ENST00000340058 COPZ2Q9P299 210 aa13.41□□□□□ -0.26
RET-201ENST00000340058 MAB21L2Q9Y586 359 aa13.41□□□□□ -0.26
RET-201ENST00000340058 SCN4AP35499 1836 aa13.4□□□□□ -0.26
RET-201ENST00000340058 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.4□□□□□ -0.26
RET-201ENST00000340058 CD79BP40259 229 aa13.4□□□□□ -0.26
RET-201ENST00000340058 SLC26A5P58743 744 aa13.4□□□□□ -0.26
RET-201ENST00000340058 FCN2Q15485 313 aa13.4□□□□□ -0.26
RET-201ENST00000340058 PLCZ1Q86YW0 608 aa13.4□□□□□ -0.26
RET-201ENST00000340058 MFSD8Q8NHS3 518 aa13.4□□□□□ -0.26
RET-201ENST00000340058 PIGTQ969N2 578 aa13.4□□□□□ -0.26
RET-201ENST00000340058 GIMAP5Q96F15 307 aa13.4□□□□□ -0.26
RET-201ENST00000340058 CCDC74BQ96LY2 380 aa13.4□□□□□ -0.26
RET-201ENST00000340058 ACTR6Q9GZN1 396 aa13.4□□□□□ -0.26
RET-201ENST00000340058 ABRACLQ9P1F3 81 aa13.4□□□□□ -0.26
RET-201ENST00000340058 A0A0A6YYH2 397 aa13.4□□□□□ -0.26
RET-201ENST00000340058 A6NJ64 397 aa13.4□□□□□ -0.26
RET-201ENST00000340058 CNOT4O95628 575 aaKnown RBP13.4□□□□□ -0.26
RET-201ENST00000340058 CD34P28906 385 aa13.4□□□□□ -0.26
RET-201ENST00000340058 SEC61A1P61619 476 aaKnown RBP13.4□□□□□ -0.26
RET-201ENST00000340058 DGCR2P98153 550 aa13.4□□□□□ -0.26
RET-201ENST00000340058 ELP2Q6IA86 826 aa13.4□□□□□ -0.26
RET-201ENST00000340058 H1FNTQ75WM6 255 aaPredicted RBP13.4□□□□□ -0.26
RET-201ENST00000340058 NT5CQ8TCD5 201 aa13.4□□□□□ -0.26
RET-201ENST00000340058 GIMAP1Q8WWP7 306 aa13.4□□□□□ -0.26
RET-201ENST00000340058 GPA33Q99795 319 aa13.4□□□□□ -0.26
RET-201ENST00000340058 VN1R1Q9GZP7 353 aa13.4□□□□□ -0.26
RET-201ENST00000340058 ARRDC1-AS1Q9H2J1 176 aa13.4□□□□□ -0.26
RET-201ENST00000340058 FBXO9Q9UK97 447 aaPredicted RBP13.4□□□□□ -0.26
RET-201ENST00000340058 PCDHGA1Q9Y5H4 931 aa13.4□□□□□ -0.26
RET-201ENST00000340058 SIX6O95475 246 aa13.4□□□□□ -0.26
RET-201ENST00000340058 MTNR1BP49286 362 aa13.4□□□□□ -0.26
RET-201ENST00000340058 DIO1P49895 249 aa13.4□□□□□ -0.26
RET-201ENST00000340058 CSRP3P50461 194 aa13.4□□□□□ -0.26
RET-201ENST00000340058 P2RX1P51575 399 aa13.4□□□□□ -0.26
RET-201ENST00000340058 SSX6Q7RTT6 188 aa13.4□□□□□ -0.26
RET-201ENST00000340058 TPRA1Q86W33 373 aa13.4□□□□□ -0.26
RET-201ENST00000340058 NDUFB11Q9NX14 153 aa13.4□□□□□ -0.26
RET-201ENST00000340058 ARHGEF17Q96PE2 2063 aaPredicted RBP13.39□□□□□ -0.27
RET-201ENST00000340058 IGHV1OR21-1A0A087WYE8 117 aa13.39□□□□□ -0.27
RET-201ENST00000340058 MTRF1O75570 445 aaKnown RBP13.39□□□□□ -0.27
RET-201ENST00000340058 RPL27P61353 136 aaKnown RBP13.39□□□□□ -0.27
RET-201ENST00000340058 SLC25A35Q3KQZ1 300 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SLC16A12Q6ZSM3 486 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SLC16A14Q7RTX9 510 aa13.39□□□□□ -0.27
RET-201ENST00000340058 MRPL21Q7Z2W9 205 aaKnown RBP13.39□□□□□ -0.27
RET-201ENST00000340058 SNAPC3Q92966 411 aa13.39□□□□□ -0.27
RET-201ENST00000340058 BANF2Q9H503 90 aa13.39□□□□□ -0.27
RET-201ENST00000340058 MRPL33O75394 65 aaKnown RBP13.39□□□□□ -0.27
RET-201ENST00000340058 CBX7O95931 251 aa13.39□□□□□ -0.27
RET-201ENST00000340058 CTSBP07858 339 aa13.39□□□□□ -0.27
RET-201ENST00000340058 EVI2BP34910 448 aa13.39□□□□□ -0.27
RET-201ENST00000340058 ARHGDIBP52566 201 aa13.39□□□□□ -0.27
RET-201ENST00000340058 KCTD20Q7Z5Y7 419 aa13.39□□□□□ -0.27
RET-201ENST00000340058 VASH2Q86V25 355 aa13.39□□□□□ -0.27
RET-201ENST00000340058 BPIFB2Q8N4F0 458 aa13.39□□□□□ -0.27
RET-201ENST00000340058 ARIH2OSQ8N7S6 290 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SMRP1Q8NCR6 262 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SGCZQ96LD1 299 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SCGB3A2Q96PL1 93 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SLIRPQ9GZT3 109 aaKnown RBP13.39□□□□□ -0.27
RET-201ENST00000340058 POLE3Q9NRF9 147 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SIGLEC7Q9Y286 467 aa13.39□□□□□ -0.27
RET-201ENST00000340058 OR7C1O76099 320 aaPredicted RBP13.39□□□□□ -0.27
RET-201ENST00000340058 LIMS3P0CW19 117 aa13.39□□□□□ -0.27
RET-201ENST00000340058 LIMS4P0CW20 117 aa13.39□□□□□ -0.27
RET-201ENST00000340058 CD300CQ08708 224 aa13.39□□□□□ -0.27
RET-201ENST00000340058 MALLQ13021 153 aa13.39□□□□□ -0.27
RET-201ENST00000340058 FAM189A2Q15884 450 aa13.39□□□□□ -0.27
RET-201ENST00000340058 PRICKLE4Q2TBC4 344 aa13.39□□□□□ -0.27
RET-201ENST00000340058 C11orf91Q3C1V1 193 aa13.39□□□□□ -0.27
RET-201ENST00000340058 CCDC36Q8IYA8 594 aa13.39□□□□□ -0.27
RET-201ENST00000340058 ZNF321PQ8N8H1 164 aa13.39□□□□□ -0.27
RET-201ENST00000340058 HYLS1Q96M11 299 aa13.39□□□□□ -0.27
RET-201ENST00000340058 SEC22CQ9BRL7 303 aa13.39□□□□□ -0.27
RET-201ENST00000340058 RANBP3Q9H6Z4 567 aaPredicted RBP13.39□□□□□ -0.27
RET-201ENST00000340058 IL20Q9NYY1 176 aa13.39□□□□□ -0.27
RET-201ENST00000340058 HIF3AQ9Y2N7 669 aa13.39□□□□□ -0.27
RET-201ENST00000340058 H0YIG0 161 aa13.38□□□□□ -0.27
RET-201ENST00000340058 DDAH2O95865 285 aa13.38□□□□□ -0.27
RET-201ENST00000340058 ATP1B1P05026 303 aa13.38□□□□□ -0.27
RET-201ENST00000340058 PIPP12273 146 aaPredicted RBP13.38□□□□□ -0.27
RET-201ENST00000340058 POU3F3P20264 500 aaPredicted RBP13.38□□□□□ -0.27
RET-201ENST00000340058 MNX1P50219 401 aaPredicted RBP13.38□□□□□ -0.27
RET-201ENST00000340058 SSX1Q16384 188 aa13.38□□□□□ -0.27
RET-201ENST00000340058 TAS2R8Q9NYW2 309 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms