RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 KLHL12Q53G59 568 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 KLHL22Q53GT1 634 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 ZNF585AQ6P3V2 769 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 ZBTB46Q86UZ6 589 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 CD163Q86VB7 1156 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 SYT14Q8NB59 555 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 PROKR2Q8NFJ6 384 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 BBS1Q8NFJ9 593 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 OR9Q1Q8NGQ5 310 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 ZFP3Q96NJ6 502 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 OR51V1Q9H2C8 321 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 TP63Q9H3D4 680 aaPredicted RBP12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 MED20Q9H944 212 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 HAO2Q9NYQ3 351 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 PSORS1C1Q9UIG5 152 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 NOSIPQ9Y314 301 aaKnown RBP12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 NBEAQ8NFP9 2946 aa12.9□□□□□ -0.34
NIPAL3-202ENST00000339255 MAGEA13PA6NCF6 341 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MRPS14O60783 128 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 SS18L1O75177 396 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MRPL33O75394 65 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 EEF1B2P24534 225 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC15A1P46059 708 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC35A2P78381 396 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 GLO1Q04760 184 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 RAB40BQ12829 278 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 GGTLC2Q14390 218 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 C1orf185Q5T7R7 199 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 RIPPLY2Q5TAB7 128 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 BCDIN3DQ7Z5W3 292 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 OR6V1Q8N148 313 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 POMGNT2Q8NAT1 580 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF540Q8NDQ6 660 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 OR6N1Q8NGY5 312 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 CPT1CQ8TCG5 803 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MYDGFQ969H8 173 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 NMD3Q96D46 503 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 TEAD3Q99594 435 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 NUAK2Q9H093 628 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 DUSP21Q9H596 190 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 B3GAT2Q9NPZ5 323 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MRPS18AQ9NVS2 196 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF835Q9Y2P0 537 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MBD3L4A6NDZ8 208 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MBD3L3A6NE82 208 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MBD3L5A6NJ08 208 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 ATXN7O15265 892 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 SLC16A7O60669 478 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 SMNDC1O75940 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 GLCEO94923 617 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 FADS2O95864 444 aaKnown RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 CRHP06850 196 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 AGTR1P30556 359 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 TUSC5Q8IXB3 177 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 C20orf196Q8IYI0 205 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 ST6GALNAC3Q8NDV1 305 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 OR6K6Q8NGW6 343 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 MBD3L2Q8NHZ7 208 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 KISS1RQ969F8 398 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 COPS4Q9BT78 406 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 AMBNQ9NP70 447 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 FKBP14Q9NWM8 211 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 GLTPQ9NZD2 209 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 FOXD3Q9UJU5 478 aaPredicted RBP12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 EMC9Q9Y3B6 208 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 PCDHGB1Q9Y5G3 927 aa12.89□□□□□ -0.35
NIPAL3-202ENST00000339255 NBASA2RRP1 2371 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 BSNQ9UPA5 3926 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 IGLV1-36A0A0B4J1U3 117 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 CCDC182A6NF36 153 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 KHDRBS3O75525 346 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 GYPBP06028 91 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 RPSAP08865 295 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 CLUP10909 449 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 CTLA4P16410 223 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 SELENOPP49908 381 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 ZNF133P52736 654 aaPredicted RBP12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 NFATC3Q12968 1075 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 RPTNQ6XPR3 784 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 AHSA2Q719I0 299 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 FAM214BQ7L5A3 538 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 TMEM54Q969K7 222 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 APH1AQ96BI3 265 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 RNFT2Q96EX2 444 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 LINC00470Q9BZP3 86 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 SLCO5A1Q9H2Y9 848 aa12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 SRA1Q9HD15 236 aaKnown RBP12.88□□□□□ -0.35
NIPAL3-202ENST00000339255 PTGES3LE9PB15 166 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 DCTN6O00399 190 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 DCKP27707 260 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 GSTT1P30711 240 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 TIMP3P35625 211 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 CASP6P55212 293 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 FMODQ06828 376 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 ST3GAL4Q11206 333 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 GUSBP1Q15486 140 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 C10orf128Q5T292 105 aa12.87□□□□□ -0.35
NIPAL3-202ENST00000339255 CARD17Q5XLA6 110 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms