RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 B4GALT7Q9UBV7 327 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 RASD1Q9Y272 281 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 ZNF891A8MT65 544 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 LINC01387J3KSC0 135 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 SLC16A7O60669 478 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 RAMP1O60894 148 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 MTRF1O75570 445 aaKnown RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 HPNP05981 417 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 CELP19835 753 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 KLK2P20151 261 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 AGFG1P52594 562 aaKnown RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 OR12D2P58182 307 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 HYAL4Q2M3T9 481 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 WIPI1Q5MNZ9 446 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 CDC20BQ86Y33 519 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 ZFP41Q8N8Y5 198 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 KBTBD8Q8NFY9 601 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 TRMT61AQ96FX7 289 aaKnown RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 SFXN2Q96NB2 322 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 DACH2Q96NX9 599 aa13.82□□□□□ -0.2
LIMS1-202ENST00000338045 MRPL13Q9BYD1 178 aaKnown RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 SIRT4Q9Y6E7 314 aaPredicted RBP13.82□□□□□ -0.2
LIMS1-202ENST00000338045 FREM3P0C091 2139 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 J3QLW9 94 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 GFRA3O60609 400 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 TRAPPC6AO75865 159 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 GLSO94925 669 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-202ENST00000338045 ZNF19P17023 458 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 BIDP55957 195 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 TAS2R43P59537 309 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 RPS25P62851 125 aaKnown RBP13.81□□□□□ -0.2
LIMS1-202ENST00000338045 POU4F3Q15319 338 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 RSPO4Q2I0M5 234 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-202ENST00000338045 ZNF684Q5T5D7 378 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 ESPNLQ6ZVH7 1005 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 ZBTB8BQ8NAP8 495 aaPredicted RBP13.81□□□□□ -0.2
LIMS1-202ENST00000338045 MRPL48Q96GC5 212 aaKnown RBP13.81□□□□□ -0.2
LIMS1-202ENST00000338045 SCMH1Q96GD3 660 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 ADGRG7Q96K78 797 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 INTS14Q96SY0 518 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 TTTY12Q9BZ98 90 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 SSR3Q9UNL2 185 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 CELSR3Q9NYQ7 3312 aa13.81□□□□□ -0.2
LIMS1-202ENST00000338045 PNMA8CA0A1B0GUJ8 204 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TVP23AA6NH52 213 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 E9PI62 339 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 ZNF670-ZNF695F2Z2N8 137 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TNFSF11O14788 317 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 PLPP2O43688 288 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 CLPXO76031 633 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 VAMP5O95183 116 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 CD46P15529 392 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 ZNF43P17038 809 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 CD53P19397 219 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 PTGS2P35354 604 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 CLDN20P56880 219 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 RAC3P60763 192 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 ETFDHQ16134 617 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 DNM1P34Q6PK57 102 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 IGFL2Q6UWQ7 119 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 HDDC2Q7Z4H3 204 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 GALNTL5Q7Z4T8 443 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 OR6X1Q8NH79 312 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 COQ7Q99807 217 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 NAA11Q9BSU3 229 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 SLIRPQ9GZT3 109 aaKnown RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 RERGLQ9H628 205 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 WDR76Q9H967 626 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 DCDC2BA2VCK2 349 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 CENPBD1B2RD01 187 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 KLRC4-KLRK1H3BQV0 150 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 LRRTM2O43300 516 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 GALP22466 123 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 FGF9P31371 208 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 CD97P48960 835 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 GLO1Q04760 184 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 DGUOKQ16854 277 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 GPAT4Q86UL3 456 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 PIAS4Q8N2W9 510 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 ZFP62Q8NB50 900 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 SYT14Q8NB59 555 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 FDCSPQ8NFU4 85 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TBC1D15Q8TC07 691 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 SNX33Q8WV41 574 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TMEM203Q969S6 136 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 PELI1Q96FA3 418 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 SLC25A44Q96H78 314 aaPredicted RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TM9SF2Q99805 663 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 EMC6Q9BV81 110 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 SRXN1Q9BYN0 137 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 EXOSC4Q9NPD3 245 aaKnown RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 MRPL22Q9NWU5 206 aaKnown RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TXNL4BQ9NX01 149 aaKnown RBP13.8□□□□□ -0.2
LIMS1-202ENST00000338045 KLHDC2Q9Y2U9 406 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 PMF1-BGLAPU3KQ54 211 aa13.8□□□□□ -0.2
LIMS1-202ENST00000338045 TRDV1A0A1B0GX56 115 aa13.79□□□□□ -0.2
LIMS1-202ENST00000338045 PRR32B1ATL7 298 aa13.79□□□□□ -0.2
LIMS1-202ENST00000338045 H0YC42 278 aa13.79□□□□□ -0.2
LIMS1-202ENST00000338045 GPANK1O95872 356 aa13.79□□□□□ -0.2
LIMS1-202ENST00000338045 PGA4P0DJD7 388 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms