RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 MMACHCQ9Y4U1 282 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ZFHX4Q86UP3 3567 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 TTC28Q96AY4 2481 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CPAMD8Q8IZJ3 1885 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 IGHV5-10-1A0A0J9YXX1 117 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 IFITM5A6NNB3 132 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ALG1L2C9J202 215 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ARL6IP5O75915 188 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 PGCP20142 388 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ANOS1P23352 680 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 RBMS1P29558 406 aaKnown RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 DCTDP32321 178 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 GDNFP39905 211 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CLDN20P56880 219 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 STARD6P59095 220 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 UBE2MP61081 183 aaKnown RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 ALKBH1Q13686 389 aaKnown RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 GGTLC2Q14390 218 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 LYSMD4Q5XG99 296 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 TCEAL6Q6IPX3 200 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ANKRD37Q7Z713 158 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 SCAIQ8N9R8 606 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 OR2G2Q8NGZ5 317 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 OR2T4Q8NH00 348 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 PMM1Q92871 262 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 TCEAL3Q969E4 200 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 NKD1Q969G9 470 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ZNF578Q96N58 590 aaPredicted RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 NECAB3Q96P71 396 aaPredicted RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 CRB3Q9BUF7 120 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CHIAQ9BZP6 476 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 OR10A4Q9H209 315 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 GAREM1Q9H706 876 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CGGBP1Q9UFW8 167 aaPredicted RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 OR5V1Q9UGF6 321 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 FKBP7Q9Y680 259 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 TRAV36DV7A0A075B6V5 113 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 PMS2P1A4D2B8 440 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ANXA2P2A6NMY6 339 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 RAMP1O60894 148 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ANXA2P07355 339 aaKnown RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 SLC2A1P11166 492 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CCL4P13236 92 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CDK2P24941 298 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CBFBQ13951 182 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 EIF2B1Q14232 305 aaKnown RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 BTBD16Q32M84 506 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 LRFN4Q6PJG9 635 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 TMEM205Q6UW68 189 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 MAMSTRQ6ZN01 415 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 NOXA1Q86UR1 476 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 CDC20BQ86Y33 519 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 ZNF440Q8IYI8 595 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 SYS1Q8N2H4 156 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 OR51A2Q8NGJ7 313 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 KIAA1143Q96AT1 154 aaPredicted RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 JSRP1Q96MG2 331 aaPredicted RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 UBL7Q96S82 380 aaPredicted RBP7.97□□□□□ -1.13
SNCA-201ENST00000336904 CACNG6Q9BXT2 260 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 UCK1Q9HA47 277 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 FBXL2Q9UKC9 423 aa7.97□□□□□ -1.13
SNCA-201ENST00000336904 LY6G6EA0A0G2JKS1 128 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 DCDC2BA2VCK2 349 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 ORC5O43913 435 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 FADS1O60427 444 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 ABHD16AO95870 558 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 ALOX5APP20292 161 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 CDAP32320 146 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 NUDT1P36639 197 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 GFOD2Q3B7J2 385 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 WDR45BQ5MNZ6 344 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 ZNF684Q5T5D7 378 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 MAMDC2Q7Z304 686 aaPredicted RBP7.96□□□□□ -1.13
SNCA-201ENST00000336904 SLITRK4Q8IW52 837 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 OR11H7Q8NGC8 314 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 OR8S1Q8NH09 359 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 ACOT12Q8WYK0 555 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 DVL3Q92997 716 aaPredicted RBP7.96□□□□□ -1.13
SNCA-201ENST00000336904 MICU1Q9BPX6 476 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 PELOQ9BRX2 385 aaKnown RBP7.96□□□□□ -1.13
SNCA-201ENST00000336904 MRTO4Q9UKD2 239 aaKnown RBP7.96□□□□□ -1.13
SNCA-201ENST00000336904 EMC9Q9Y3B6 208 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 HSPB11Q9Y547 144 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 U3KQA8 63 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 V9GY05 133 aa7.96□□□□□ -1.13
SNCA-201ENST00000336904 ARID1AO14497 2285 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 IGHV3-15A0A0B4J1V0 119 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 PRSS37A4D1T9 235 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 TMEM200CA6NKL6 621 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 ZNF814B7Z6K7 855 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 EFNA2O43921 213 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 TRIM3O75382 744 aaPredicted RBP7.96□□□□□ -1.14
SNCA-201ENST00000336904 KHDRBS3O75525 346 aaKnown RBP7.96□□□□□ -1.14
SNCA-201ENST00000336904 AHSA1O95433 338 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 SERPINA3P01011 423 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 HLA-DQB1P01920 261 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 SLC6A1P30531 599 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 SSTR2P30874 369 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 P2RX1P51575 399 aa7.96□□□□□ -1.14
SNCA-201ENST00000336904 EPHA4P54764 986 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms