RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 OR6V1Q8N148 313 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 ABHD4Q8TB40 342 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 OR5M11Q96RB7 305 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 THAP7Q9BT49 309 aaPredicted RBP13.71□□□□□ -0.22
C9orf47-201ENST00000334490 TMEM59Q9BXS4 323 aa13.71□□□□□ -0.22
C9orf47-201ENST00000334490 FER1L6Q2WGJ9 1857 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF701M0R085 212 aaPredicted RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 SPINT1O43278 529 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 IGFBP1P08833 259 aaPredicted RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 UBCP0CG48 685 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 RPL19P84098 196 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 FGGYQ96C11 551 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 AIFM2Q9BRQ8 373 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 ASH2LQ9UBL3 628 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 B3GALT5Q9Y2C3 310 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 ATAD5Q96QE3 1844 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 A0A1W2PPC1 479 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 M0R233 179 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 HIST1H1CP16403 213 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 GRB2P62993 217 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 LSAMPQ13449 338 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 OR1C1Q15619 314 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF695Q8IW36 515 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 BRIX1Q8TDN6 353 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 FBXL4Q9UKA2 621 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 PROCRQ9UNN8 238 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 PMS2P1A4D2B8 440 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 AKAIN1P0CW23 69 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 SHC1P29353 583 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 CD40LGP29965 261 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 SDHAP31040 664 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 IDH3GP51553 393 aaPredicted RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 RIPPLY1Q0D2K3 151 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 FOXF1Q12946 379 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 AIMP2Q13155 320 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 ACSM5Q6NUN0 579 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 OR14A2Q96R54 314 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 GALNT9Q9HCQ5 603 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 KCNE3Q9Y6H6 103 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 CTDSP2O14595 271 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 NCR1O76036 304 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 LPLP06858 475 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 HTR2CP28335 458 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 PHC1P78364 1004 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 KIRREL2Q6UWL6 708 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 OR6F1Q8NGZ6 308 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 MUL1Q969V5 352 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 TREM1Q9NP99 234 aa13.7□□□□□ -0.22
C9orf47-201ENST00000334490 HINT3Q9NQE9 182 aaKnown RBP13.7□□□□□ -0.22
C9orf47-201ENST00000334490 IGHV3-15A0A0B4J1V0 119 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 MCRIP1C9JLW8 97 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 RAB40ALP0C0E4 278 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 SBK2P0C263 348 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 ABCD3P28288 659 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 CLN3Q13286 438 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 CD163Q86VB7 1156 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 LRRC28Q86X40 367 aaPredicted RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 ZFAND2BQ8WV99 257 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 RAB40AQ8WXH6 277 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 C11orf40Q8WZ69 217 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 SNAPC3Q92966 411 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 NRTNQ99748 197 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 NICN1Q9BSH3 213 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 NRIP3Q9NQ35 241 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 DECR2Q9NUI1 292 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 MRPS28Q9Y2Q9 187 aaKnown RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 ZNF891A8MT65 544 aaPredicted RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 D6RAR5 112 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 SNRPBP14678 240 aaKnown RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 EPHA1P21709 976 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 HOXD12P35452 270 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 VEGFCP49767 419 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 SNRPGP62308 76 aaKnown RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 LTC4SQ16873 150 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 NELFAQ9H3P2 528 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 MBD1Q9UIS9 605 aaPredicted RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 KCNE1BA0A087WTH5 132 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 A0A087WZY1 265 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 A6NJ64 397 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 NXPH2O95156 264 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 CCDC58Q4VC31 144 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 PRAMEF9Q5VWM5 478 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 MEX3BQ6ZN04 569 aaKnown RBP13.69□□□□□ -0.22
C9orf47-201ENST00000334490 PIGTQ969N2 578 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 CMC2Q9NRP2 79 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 HSPB6O14558 160 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 RTL6Q6ICC9 239 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 OXGR1Q96P68 337 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 CACNA1EQ15878 2313 aa13.69□□□□□ -0.22
C9orf47-201ENST00000334490 ZNFX1Q9P2E3 1918 aaKnown RBP13.68□□□□□ -0.22
C9orf47-201ENST00000334490 NAP1L6A6NFF2 107 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 SCG5P05408 212 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 S100A6P06703 90 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 LIPNQ5VXI9 398 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 OR56B1Q8NGI3 324 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 KCNG3Q8TAE7 436 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 PHB2Q99623 299 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 FAM117AQ9C073 453 aa13.68□□□□□ -0.22
C9orf47-201ENST00000334490 CLEC2DQ9UHP7 191 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms