RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CASP12Q6UXS9 341 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 BTLAQ7Z6A9 289 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 ENTHD1Q8IYW4 607 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 SLC37A3Q8NCC5 494 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 NPEPL1Q8NDH3 523 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 WNT2BQ93097 391 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 HRASLS5Q96KN8 279 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 DMRTA2Q96SC8 542 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 PITX2Q99697 317 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 TP63Q9H3D4 680 aaPredicted RBP14.61□□□□□ -0.07
SHOX-201ENST00000334060 BCO1Q9HAY6 547 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 SLC25A19Q9HC21 320 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 GMPPBQ9Y5P6 360 aa14.61□□□□□ -0.07
SHOX-201ENST00000334060 PHF3Q92576 2039 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 RNF224P0DH78 156 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 PGA4P0DJD7 388 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 PGA3P0DJD8 388 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 PSKH1P11801 424 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 SDHAP31040 664 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 EFNB1P98172 346 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.6□□□□□ -0.07
SHOX-201ENST00000334060 POU4F3Q15319 338 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 TSC22D1Q15714 1073 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 NDUFA5Q16718 116 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 DHRSXQ8N5I4 330 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 ARIH2OSQ8N7S6 290 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 CHPT1Q8WUD6 406 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 PTP4A1Q93096 173 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 OTULINQ96BN8 352 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 YTHDF1Q9BYJ9 559 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 OPN3Q9H1Y3 402 aaPredicted RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 RERGLQ9H628 205 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 DNAJC27Q9NZQ0 273 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 GRHPRQ9UBQ7 328 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 MEMO1Q9Y316 297 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 ORC6Q9Y5N6 252 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 NOX1Q9Y5S8 564 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 UTP20O75691 2785 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 DIDO1Q9BTC0 2240 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 MYO18BQ8IUG5 2567 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 A0A1W2PRG6 482 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 M0R3G1 203 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 SS18L1O75177 396 aaPredicted RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 IGHMP01871 453 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 SCG5P05408 212 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 YES1P07947 543 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 CTLA4P16410 223 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 CAPGP40121 348 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 BCAP31P51572 246 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 ADORA2A-AS1P86434 159 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 MOGQ16653 247 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 KRT80Q6KB66 452 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 PLBD1Q6P4A8 553 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 USP51Q70EK9 711 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 STARD4Q96DR4 205 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 KCNK17Q96T54 332 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 MRPL13Q9BYD1 178 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 RPRD1BQ9NQG5 326 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 SLC7A10Q9NS82 523 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 KLHL9Q9P2J3 617 aa14.6□□□□□ -0.07
SHOX-201ENST00000334060 NOSIPQ9Y314 301 aaKnown RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 USP9XQ93008 2570 aaPredicted RBP14.6□□□□□ -0.07
SHOX-201ENST00000334060 UBR5O95071 2799 aaPredicted RBP14.59□□□□□ -0.07
SHOX-201ENST00000334060 TENM4Q6N022 2769 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 LOC102725191A0A1B0GVB3 256 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 CCL21O00585 134 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 SLC16A6O15403 523 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 LRRTM2O43300 516 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 TLX2O43763 284 aaPredicted RBP14.59□□□□□ -0.07
SHOX-201ENST00000334060 APOL3O95236 402 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 OCM2P0CE71 109 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 OCMP0CE72 109 aaPredicted RBP14.59□□□□□ -0.07
SHOX-201ENST00000334060 GABRA1P14867 456 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 GABRB1P18505 474 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 PYCR1P32322 319 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 NUDT6P53370 316 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 SNAPC1Q16533 368 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 LRFN4Q6PJG9 635 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 AAED1Q7RTV5 226 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 CPOQ8IVL8 374 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 MCEMP1Q8IX19 187 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 SGCDQ92629 289 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 NSMAFQ92636 917 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 DOK1Q99704 481 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 SF3B5Q9BWJ5 86 aaKnown RBP14.59□□□□□ -0.07
SHOX-201ENST00000334060 NUAK2Q9H093 628 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 AMBNQ9NP70 447 aa14.59□□□□□ -0.07
SHOX-201ENST00000334060 PAQR5Q9NXK6 330 aaPredicted RBP14.59□□□□□ -0.07
SHOX-201ENST00000334060 FUOMA2VDF0 154 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 ARPC3O15145 178 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 MPZL1O95297 269 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 TXNDC12O95881 172 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 ADRA2AP08913 450 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 TMIGD3P0DMS9 266 aaPredicted RBP14.58□□□□□ -0.07
SHOX-201ENST00000334060 BMP5P22003 454 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 CEACAM8P31997 349 aaPredicted RBP14.58□□□□□ -0.07
SHOX-201ENST00000334060 CDAP32320 146 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 RPS27P42677 84 aaKnown RBP14.58□□□□□ -0.07
SHOX-201ENST00000334060 SMSP52788 366 aa14.58□□□□□ -0.07
SHOX-201ENST00000334060 PER3P56645 1201 aa14.58□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms