RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 IGHMP01871 453 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 CD14P08571 375 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 RAP2AP10114 183 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 CBR1P16152 277 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 ARR3P36575 388 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 ACVR1BP36896 505 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 MAGEA2P43356 314 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 LIMS1P48059 325 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 RAP1BP61224 184 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 RAP1AP62834 184 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 RUNX1T1Q06455 604 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 TOP3AQ13472 1001 aaPredicted RBP12.23□□□□□ -0.45
LIMS1-201ENST00000332345 FHL1Q13642 323 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 DEFB113Q30KQ7 82 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 THEM4Q5T1C6 240 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 ZER1Q7Z7L7 766 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 IGFN1Q86VF2 1251 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 AQP12AQ8IXF9 295 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 LRRC75AQ8NAA5 344 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 NOXO1Q8NFA2 376 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 LILRB1Q8NHL6 650 aaPredicted RBP12.23□□□□□ -0.45
LIMS1-201ENST00000332345 NANOS1Q8WY41 292 aaKnown RBP12.23□□□□□ -0.45
LIMS1-201ENST00000332345 SLC38A2Q96QD8 506 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 ALG12Q9BV10 488 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 NELFAQ9H3P2 528 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 DENND2DQ9H6A0 471 aaPredicted RBP12.23□□□□□ -0.45
LIMS1-201ENST00000332345 CRNNQ9UBG3 495 aaPredicted RBP12.23□□□□□ -0.45
LIMS1-201ENST00000332345 GRHPRQ9UBQ7 328 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 POU2F3Q9UKI9 436 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 SIGLEC7Q9Y286 467 aa12.23□□□□□ -0.45
LIMS1-201ENST00000332345 RAI1Q7Z5J4 1906 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-201ENST00000332345 SHISA9B4DS77 424 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 TMCC2O75069 709 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 SEC14L2O76054 403 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 CRYAAP02489 173 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 OR8G3PP0DMU2 310 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 CD79AP11912 226 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 B4GALT1P15291 398 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 GUCA1AP43080 201 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-201ENST00000332345 ERVK-25P63136 954 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 TUBA1BP68363 451 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 TUBA4AP68366 448 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 CD47Q08722 323 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 FLOT2Q14254 428 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 TUBA1AQ71U36 451 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 SLC22A24Q8N4F4 322 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 ARIH2OSQ8N7S6 290 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 IL17RDQ8NFM7 739 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 KBTBD8Q8NFY9 601 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 GNPDA2Q8TDQ7 276 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 SMAP2Q8WU79 429 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-201ENST00000332345 TMEM171Q8WVE6 324 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 HDAC2Q92769 488 aaKnown RBP12.22□□□□□ -0.45
LIMS1-201ENST00000332345 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
LIMS1-201ENST00000332345 KCNK17Q96T54 332 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 KATNB1Q9BVA0 655 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 MMADHCQ9H3L0 296 aaPredicted RBP12.22□□□□□ -0.45
LIMS1-201ENST00000332345 SMURF2Q9HAU4 748 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 FAIMQ9NVQ4 179 aa12.22□□□□□ -0.45
LIMS1-201ENST00000332345 ARID1AO14497 2285 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 IGHV1-18A0A0C4DH31 117 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 XKRYO14609 159 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 ARHGEF9O43307 516 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 AHCYL1O43865 530 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 SMPD2O60906 423 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 UBL3O95164 117 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 IGKV3-15P01624 115 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 FPR3P25089 353 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 ZNF133P52736 654 aaPredicted RBP12.21□□□□□ -0.45
LIMS1-201ENST00000332345 CDH11P55287 796 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 MYBPC1Q00872 1141 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 GSG1Q2KHT4 349 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 NRN1LQ496H8 165 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 C10orf128Q5T292 105 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 GPR139Q6DWJ6 353 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 OR2T5Q6IEZ7 315 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 C1orf94Q6P1W5 598 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 DPY19L2P2Q6ZN68 376 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 DPPA2Q7Z7J5 298 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 OR2T29Q8NH02 315 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 NEUROG1Q92886 237 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 CHID1Q9BWS9 393 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 CADM1Q9BY67 442 aaKnown RBP12.21□□□□□ -0.45
LIMS1-201ENST00000332345 CXXC4Q9H2H0 198 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 KCNN2Q9H2S1 579 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 CXorf56Q9H5V9 222 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 YY1AP1Q9H869 796 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 REEP1Q9H902 201 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 TMEM38BQ9NVV0 291 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 B3GNT2Q9NY97 397 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 POMPQ9Y244 141 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 LYVE1Q9Y5Y7 322 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 ATP23Q9Y6H3 246 aa12.21□□□□□ -0.45
LIMS1-201ENST00000332345 PRRC2AP48634 2157 aaKnown RBP12.2□□□□□ -0.46
LIMS1-201ENST00000332345 AKAP9Q99996 3911 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 PLCE1Q9P212 2302 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 DHRS12A0PJE2 317 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 CCNB2O95067 398 aa12.2□□□□□ -0.46
LIMS1-201ENST00000332345 IGLV1-44P01699 117 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms