RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 OR11H7Q8NGC8 314 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 OR51A4Q8NGJ6 313 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 OR52I2Q8NH67 350 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ATOH1Q92858 354 aaPredicted RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 DCBLD2Q96PD2 775 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 OR2M2Q96R28 347 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 OR8B4Q96RC9 309 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 MESP1Q9BRJ9 268 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 GON7Q9BXV9 100 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 SEMA4CQ9C0C4 833 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 MRPL22Q9NWU5 206 aaKnown RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 ATXN7L1Q9ULK2 861 aaPredicted RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 SRPK3Q9UPE1 567 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 A0A0C4DFX4 3053 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 K7ESF4 209 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ZNF593O00488 134 aaPredicted RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 RAF1P04049 648 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 RAB40ALP0C0E4 278 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 H2AFB2P0C5Z0 115 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 RAG2P55895 527 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 RPS15P62841 145 aaKnown RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 RASGEF1BQ0VAM2 473 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 GSG1Q2KHT4 349 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ODF4Q2M2E3 257 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 WDR38Q5JTN6 314 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 LAMTOR1Q6IAA8 161 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 FDX2Q6P4F2 183 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 TMEM71Q6P5X7 295 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 LRRN1Q6UXK5 716 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ZNF574Q6ZN55 896 aaPredicted RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 SLC35D2Q76EJ3 337 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 APCDD1LQ8NCL9 501 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ZNF417Q8TAU3 575 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 GPR148Q8TDV2 347 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 RAB40AQ8WXH6 277 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 RELTQ969Z4 430 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 HAVCR1Q96D42 359 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ZNF587Q96SQ5 575 aaPredicted RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 ULBP3Q9BZM4 244 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 MRPL15Q9P015 296 aaKnown RBP13.13□□□□□ -0.31
TPM3-206ENST00000330188 ETV7Q9Y603 341 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 ALPK2Q86TB3 2170 aa13.13□□□□□ -0.31
TPM3-206ENST00000330188 IGLV3-12A0A075B6K2 115 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 CENPBD1B2RD01 187 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SULT1B1O43704 296 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SLC16A7O60669 478 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 ZNF354AO60765 605 aaPredicted RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 KRT33AO76009 404 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 AHSA1O95433 338 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 HLA-DQA2P01906 255 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 CTLA4P16410 223 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SDHBP21912 280 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 CCR9P51686 369 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SLC17A1Q14916 467 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 ETFDHQ16134 617 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 MEP1BQ16820 701 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 CD276Q5ZPR3 534 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 ANKRD37Q7Z713 158 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 TMPRSS12Q86WS5 348 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SLC38A9Q8NBW4 561 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 NFAM1Q8NET5 270 aaPredicted RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 TMEM106AQ96A25 262 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 MIB2Q96AX9 1013 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 S100A16Q96FQ6 103 aaKnown RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 NPAS1Q99742 590 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SLC7A5P2Q9GIP4 190 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 ELOVL3Q9HB03 270 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 ZNF275Q9NSD4 429 aaPredicted RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 AKAP7Q9P0M2 348 aaPredicted RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 KLHL9Q9P2J3 617 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 RCE1Q9Y256 329 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SLC22A23A1A5C7 686 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 FTCDNL1E5RQL4 147 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 H3BSH0 61 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 GPR171O14626 319 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 GMDSO60547 372 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 OR6A2O95222 327 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 MAS1P04201 325 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 CENPAP49450 140 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 SLC26A5P58743 744 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 MELKQ14680 651 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 TMEM255AQ5JRV8 349 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 OR5M10Q6IEU7 315 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 PTCRAQ6ISU1 281 aaPredicted RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 RABEPKQ7Z6M1 372 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 MISPQ8IVT2 679 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 ASB17Q8WXJ9 295 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 CLDN23Q96B33 292 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 PHF21AQ96BD5 680 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 HRASLSQ9HDD0 168 aa13.12□□□□□ -0.31
TPM3-206ENST00000330188 MRPL39Q9NYK5 338 aaKnown RBP13.12□□□□□ -0.31
TPM3-206ENST00000330188 SPEGQ15772 3267 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 ANXA2P2A6NMY6 339 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 H0YC42 278 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 TOX3O15405 576 aaPredicted RBP13.11□□□□□ -0.31
TPM3-206ENST00000330188 FABP7O15540 132 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 AKR7A2O43488 359 aa13.11□□□□□ -0.31
TPM3-206ENST00000330188 ZNF780AO75290 641 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms