RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 CALHM2Q9HA72 323 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 HAO2Q9NYQ3 351 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 SVILO95425 2214 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 ALPK2Q86TB3 2170 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 IGLV1-36A0A0B4J1U3 117 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 CD8B2A6NJW9 211 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 PTGES3LE9PB15 166 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 DCTN6O00399 190 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 SLC43A1O75387 559 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 SMIM18P0DKX4 95 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 GABRA1P14867 456 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 CTLA4P16410 223 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 GSTT1P30711 240 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 PYCR1P32322 319 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 CSNK1A1P48729 337 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 SELENOPP49908 381 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 CDH15P55291 814 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 FMODQ06828 376 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 DBPQ10586 325 aaPredicted RBP9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 RAB40BQ12829 278 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 POU4F2Q12837 409 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 ST3GAL2Q16842 350 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 THEM4Q5T1C6 240 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 LINC01590Q5TEZ4 76 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 NSUN5P2Q63ZY6 315 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF585AQ6P3V2 769 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 ZNF773Q6PK81 442 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 AAED1Q7RTV5 226 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 C20orf196Q8IYI0 205 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 WNT2BQ93097 391 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 INTS12Q96CB8 462 aaKnown RBP9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 RBP7Q96R05 134 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 SIGLEC11Q96RL6 698 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 GLRX2Q9NS18 164 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 B9D1Q9UPM9 204 aa9.09□□□□□ -0.95
VIPAS39-201ENST00000327028 BSNQ9UPA5 3926 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 A0A087WXM4 84 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 FIGNL2A6NMB9 653 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 RGS10O43665 173 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC16A7O60669 478 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 CDK1P06493 297 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 TPOP07202 933 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 YES1P07947 543 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 HTR1AP08908 422 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ABOP16442 354 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 CENPAP49450 140 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF133P52736 654 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ST3GAL4Q11206 333 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 GFRALQ6UXV0 394 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 CD163Q86VB7 1156 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 TUSC5Q8IXB3 177 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNRF4Q8WWF5 429 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 GMPPAQ96IJ6 420 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 SRA1Q9HD15 236 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 FGF20Q9NP95 211 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ERVK-18Q9QC07 812 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 FOXD3Q9UJU5 478 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 EXOGQ9Y2C4 368 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 NOSIPQ9Y314 301 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 TRIM64CA6NLI5 447 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 SS18L1O75177 396 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 KHDRBS3O75525 346 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 HOXD4P09016 255 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 EDN3P14138 238 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 GTF3C1Q12789 2109 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 C1orf185Q5T7R7 199 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 SLC25A47Q6Q0C1 308 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 B3GNT6Q6ZMB0 384 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 PRSS48Q7RTY5 328 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 STX19Q8N4C7 294 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 POMGNT2Q8NAT1 580 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 OR51L1Q8NGJ5 315 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 OR52I1Q8NGK6 324 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 OR6K6Q8NGW6 343 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 OR6N1Q8NGY5 312 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF775Q96BV0 537 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 ZMYND19Q96E35 227 aaPredicted RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 CNN2Q99439 309 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 MRPS26Q9BYN8 205 aaKnown RBP9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 PARPBPQ9NWS1 579 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 GLTPQ9NZD2 209 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 CLEC4AQ9UMR7 237 aa9.08□□□□□ -0.96
VIPAS39-201ENST00000327028 EIF4E1BA6NMX2 242 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 TTLL8A6PVC2 850 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 RAB36O95755 333 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MT-ND2P03891 347 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 AGTR1P30556 359 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 NTF4P34130 210 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 BLVRAP53004 296 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 TUBA4AP68366 448 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 PIGFQ07326 219 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 OR2A2Q6IF42 318 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 B3GLCTQ6Y288 498 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 TMEM80Q96HE8 168 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 TM9SF2Q99805 663 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 RERGLQ9H628 205 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 ADGRL4Q9HBW9 690 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 DIMT1Q9UNQ2 313 aaKnown RBP9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 ZNF835Q9Y2P0 537 aa9.07□□□□□ -0.96
VIPAS39-201ENST00000327028 MED12LQ86YW9 2145 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms