RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 NPIPB4C9JG80 1138 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 TOXO94900 526 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 TNFAIP8O95379 198 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 RENP00797 406 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 PSKH1P11801 424 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 CENPAP49450 140 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 CLRN1P58418 232 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 SLC35A2P78381 396 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 MEP1BQ16820 701 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 LRFN4Q6PJG9 635 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 LINGO2Q7L985 606 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 AAED1Q7RTV5 226 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 ADCK1Q86TW2 530 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 ZGRF1Q86YA3 2104 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 NOXO1Q8NFA2 376 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 INTS12Q96CB8 462 aaKnown RBP13.53□□□□□ -0.24
PRPF3-201ENST00000324862 LGALS12Q96DT0 336 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 B9D1Q9UPM9 204 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 COA3Q9Y2R0 106 aaPredicted RBP13.53□□□□□ -0.24
PRPF3-201ENST00000324862 COMMD3-BMI1R4GMX3 469 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 SH3D21A4FU49 640 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 IGHG1P01857 330 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 HTR1FP30939 366 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 CDAP32320 146 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 NAA10P41227 235 aaPredicted RBP13.53□□□□□ -0.24
PRPF3-201ENST00000324862 SLC15A1P46059 708 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 MTNR1AP48039 350 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 SIRPAP78324 504 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 MEDAGQ5VYS4 303 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 RFLNBQ8N5W9 214 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 CPT1CQ8TCG5 803 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 MCHR2Q969V1 340 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 Q96MT0 163 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 TBX5Q99593 518 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 TTTY10Q9BZA0 68 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 CCDC90BQ9GZT6 254 aa13.53□□□□□ -0.24
PRPF3-201ENST00000324862 NOSIPQ9Y314 301 aaKnown RBP13.53□□□□□ -0.24
PRPF3-201ENST00000324862 IGKV3D-15A0A087WSY6 115 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 SELENOFO60613 162 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 SLC19A2O60779 497 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 QDPRP09417 244 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 CCDC159P0C7I6 412 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 SMIM18P0DKX4 95 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 CXCR4P61073 352 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 ST3GAL4Q11206 333 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 RBM48Q5RL73 367 aaKnown RBP13.52□□□□□ -0.24
PRPF3-201ENST00000324862 DOLPP1Q86YN1 238 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 MCEMP1Q8IX19 187 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 NAXEQ8NCW5 288 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 FAM57AQ8TBR7 257 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 NMD3Q96D46 503 aaKnown RBP13.52□□□□□ -0.24
PRPF3-201ENST00000324862 COPS4Q9BT78 406 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 ALG12Q9BV10 488 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 DUSP21Q9H596 190 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 WDR76Q9H967 626 aa13.52□□□□□ -0.24
PRPF3-201ENST00000324862 IGLV1-36A0A0B4J1U3 117 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 A6NIZ1 184 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 SEC14L2O76054 403 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 SCG5P05408 212 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 FOXG1P55316 489 aaPredicted RBP13.52□□□□□ -0.25
PRPF3-201ENST00000324862 RAP1BP61224 184 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 RAP1AP62834 184 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 DOC2BQ14184 412 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 TSPO2Q5TGU0 170 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 OR6N1Q8NGY5 312 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 BBC3Q96PG8 261 aaPredicted RBP13.52□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF696Q9H7X3 374 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 BCO1Q9HAY6 547 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 FOXD3Q9UJU5 478 aaPredicted RBP13.52□□□□□ -0.25
PRPF3-201ENST00000324862 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.52□□□□□ -0.25
PRPF3-201ENST00000324862 FREM1Q5H8C1 2179 aa13.52□□□□□ -0.25
PRPF3-201ENST00000324862 AHRRA9YTQ3 701 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 TFP02787 698 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 YES1P07947 543 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 AGTR1P30556 359 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 C9orf135Q5VTT2 229 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 OR52I1Q8NGK6 324 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 ADGRL4Q9HBW9 690 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 PLCXD1Q9NUJ7 323 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 FKBP14Q9NWM8 211 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 GLTPQ9NZD2 209 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 CLEC2DQ9UHP7 191 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 RPL36Q9Y3U8 105 aaKnown RBP13.51□□□□□ -0.25
PRPF3-201ENST00000324862 ZNF175Q9Y473 711 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 ADGRG4Q8IZF6 3080 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 MED12LQ86YW9 2145 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 MRPL33O75394 65 aaKnown RBP13.51□□□□□ -0.25
PRPF3-201ENST00000324862 MT-ND2P03891 347 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 SFTPCP11686 197 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 MAP2K4P45985 399 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 CSNK1A1P48729 337 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 SLC25A1P53007 311 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 RNPS1Q15287 305 aaKnown RBP13.51□□□□□ -0.25
PRPF3-201ENST00000324862 HIST3H3Q16695 136 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 VWA1Q6PCB0 445 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 B3GNT6Q6ZMB0 384 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 ZBTB46Q86UZ6 589 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 GID4Q8IVV7 300 aa13.51□□□□□ -0.25
PRPF3-201ENST00000324862 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms