RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ZAR1Q86SH2 424 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 EMC6Q9BV81 110 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 HCAR1Q9BXC0 346 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 PRRG4Q9BZD6 226 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 NXF2Q9GZY0 626 aaKnown RBP13.97□□□□□ -0.17
VARS2-201ENST00000321897 IFT22Q9H7X7 185 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 VSX1Q9NZR4 365 aaPredicted RBP13.97□□□□□ -0.17
VARS2-201ENST00000321897 AKAIN1P0CW23 69 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 ATF1P18846 271 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 TUBG1P23258 451 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 AVPI1Q5T686 147 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 RPL13AP3Q6NVV1 102 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 VN1R4Q7Z5H5 301 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 MARCH3Q86UD3 253 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 GLB1L2Q8IW92 636 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 ZNF283Q8N7M2 679 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 DAZLQ92904 295 aaKnown RBP13.97□□□□□ -0.17
VARS2-201ENST00000321897 RBP7Q96R05 134 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 OR11A1Q9GZK7 315 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 POLE3Q9NRF9 147 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 A0A0A6YYH2 397 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 TMEM82A0PJX8 343 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 A6NJ64 397 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 ZNF736B4DX44 427 aaPredicted RBP13.97□□□□□ -0.17
VARS2-201ENST00000321897 SLC33A1O00400 549 aaPredicted RBP13.97□□□□□ -0.17
VARS2-201ENST00000321897 KNG1P01042 644 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 PSMA3P25788 255 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 CRYBA2P53672 197 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 LRRC69Q6ZNQ3 347 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 BPIFB2Q8N4F0 458 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 C19orf47Q8N9M1 422 aaKnown RBP13.97□□□□□ -0.17
VARS2-201ENST00000321897 PLPP7Q8NBV4 271 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 OR1J4Q8NGS1 313 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 TMED6Q8WW62 240 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 C14orf79Q96F83 325 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 ELOVL3Q9HB03 270 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 ZNF318Q5VUA4 2279 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 CHD5Q8TDI0 1954 aa13.97□□□□□ -0.17
VARS2-201ENST00000321897 SNAPINO95295 136 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 PDSS1Q5T2R2 415 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 OR5D18Q8NGL1 313 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.96□□□□□ -0.17
VARS2-201ENST00000321897 TGIF2Q9GZN2 237 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 CHRDQ9H2X0 955 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 FAM60AQ9NP50 221 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 PRELID3BQ9Y3B1 194 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 HRKO00198 91 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 TNFSF12O43508 249 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 CT62P0C5K7 136 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 DRD1P21728 446 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 MRPL19P49406 292 aaKnown RBP13.96□□□□□ -0.17
VARS2-201ENST00000321897 RAB11BQ15907 218 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 ACBD4Q8NC06 268 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 OR10Z1Q8NGY1 313 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 ADAT1Q9BUB4 502 aaKnown RBP13.96□□□□□ -0.17
VARS2-201ENST00000321897 SDHAF3Q9NRP4 125 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 MRPS17Q9Y2R5 130 aaKnown RBP13.96□□□□□ -0.17
VARS2-201ENST00000321897 ZNF175Q9Y473 711 aa13.96□□□□□ -0.17
VARS2-201ENST00000321897 ZP3P21754 424 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 OR2B8PP59922 312 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 PDZD11Q5EBL8 140 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 KIRREL2Q6UWL6 708 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 TCTEX1D2Q8WW35 142 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 TEX101Q9BY14 249 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 ACKR4Q9NPB9 350 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 YBX2Q9Y2T7 364 aaKnown RBP13.96□□□□□ -0.18
VARS2-201ENST00000321897 SBF1O95248 1867 aa13.96□□□□□ -0.18
VARS2-201ENST00000321897 FITM1A5D6W6 292 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 AK1P00568 194 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 SLC2A5P22732 501 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 CDK2P24941 298 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 PCBP4P57723 403 aaKnown RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 EIF5AP63241 154 aaKnown RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 POU3F1Q03052 451 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 SLC9A3R2Q15599 337 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 UBE2NLQ5JXB2 153 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ADGRG3Q86Y34 549 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 C17orf47Q8NEP4 570 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 GOT1L1Q8NHS2 421 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 PHOSPHO2Q8TCD6 241 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 LINC00615Q96LM1 132 aaPredicted RBP13.95□□□□□ -0.18
VARS2-201ENST00000321897 TAS2R8Q9NYW2 309 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 ENTPD2Q9Y5L3 495 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 SERINC4A6NH21 518 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 GPR31O00270 319 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 SYT5O00445 386 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 SHOXO15266 292 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 HTR3BO95264 441 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 CD38P28907 300 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 OR1D5P58170 312 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 HNRNPKP61978 463 aaKnown RBP eCLIP13.95□□□□□ -0.18
VARS2-201ENST00000321897 GSG1Q2KHT4 349 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 EEF1A1P5Q5VTE0 462 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 C12orf73Q69YU5 71 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 OR10K2Q6IF99 312 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 CBLN2Q8IUK8 224 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 OR13C3Q8NGS6 347 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 C16orf52Q8NHV5 167 aa13.95□□□□□ -0.18
VARS2-201ENST00000321897 MR1Q95460 341 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms